| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1690 |
|---|
| Symbol | |
|---|
| ID | 6088965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1876211 |
|---|
| End bp | 1877236 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641596760 |
|---|
| Product | aminodeoxychorismate lyase |
|---|
| Protein accession | YP_001720436 |
|---|
| Protein GI | 170023931 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0437285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA AAAGCACCAA AGCACTGATC CTTTTTGTTG TGATCTGTTT GGGATTACTG
CTGTTGGGTT ATCAAAAAGT ACAAGATTTT GCGCGTCAGC CCTTGGCGAT TAAGCAAGAG
ACTTACTTTA CCTTACCGGC AGGTACCGGG CGGGTTGCTC TAGAGAATTT ATTGCTACGT
GATCATGTGA TTGCTAATAC AGGTTTATTT CCCTGGCTAC TGCGCATAGA ACCCGAACTG
GCTAATTTTA AGGCTGGGAC ATATCGTTTT ACGCCGGGTA TGACGGTACG TGAGATGCTG
GAGTTGTTGG TCAGTGGTAA AGAAGCCCAG TTTACCGTTC GTTTTATTGA AGGTAAGCGC
CTGCGTGATT GGCTGGATGA ATTACAACAG TCAAAATATA TCAAACATGT GCTGGAAGGG
AAAACAGATG CTGAAATTGC GCAGTTACTG GGGTTAAAAG AGAGTGAACA CCCCGAAGGC
TGGCTCTATC CTGATACCTA CTCCTATACC GCAGGTACAA CGGATTTAAC ACTGCTCAAA
CGTGCCCATC AACGAATGGA GAAAACCGTT GCAGAAATCT GGCAGGGGCG TGATGACGGA
TTGCCGTATA AGACCCCAAG TGATTTGGTT ACTATGGCAT CAATCATTGA AAAAGAAACC
GCGGTAAATG AGGAGCGGGA TAAGGTGGCT TCTGTCTTCA TTAACCGTTT ACGTCTTGGT
ATGCGCCTAC AAACGGATCC AACAGTGATT TATGGTATGG GCGAAAAGTA TAACGGCAAC
ATTACTCGTA AAGACTTAGA TACCCCGACA CCTTATAATA CCTATGTTAT TTCCGGTTTG
CCGCCAACCC CCATTGCCAT GCCAGGGTTG GCATCGCTGA CCGCTGCTGC CCATCCGGCC
CAAACGCCCT ATCTCTATTT TGTCGCAGAC GGCAAGGGCG GGCATACATT CACCACTAAT
TTAGCCAGTC ATAATCAAGC CGTGCGTGTT TATCGCCAGT CGCTAAAGGA TAAAAATGAA
CAGTAA
|
|---|
| Protein sequence | MKRKSTKALI LFVVICLGLL LLGYQKVQDF ARQPLAIKQE TYFTLPAGTG RVALENLLLR
DHVIANTGLF PWLLRIEPEL ANFKAGTYRF TPGMTVREML ELLVSGKEAQ FTVRFIEGKR
LRDWLDELQQ SKYIKHVLEG KTDAEIAQLL GLKESEHPEG WLYPDTYSYT AGTTDLTLLK
RAHQRMEKTV AEIWQGRDDG LPYKTPSDLV TMASIIEKET AVNEERDKVA SVFINRLRLG
MRLQTDPTVI YGMGEKYNGN ITRKDLDTPT PYNTYVISGL PPTPIAMPGL ASLTAAAHPA
QTPYLYFVAD GKGGHTFTTN LASHNQAVRV YRQSLKDKNE Q
|
|---|
| |