| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1678 |
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| Symbol | |
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| ID | 6088486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1866068 |
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| End bp | 1867030 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641596748 |
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| Product | 23S rRNA pseudouridylate synthase C |
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| Protein accession | YP_001720424 |
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| Protein GI | 170023919 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000901915 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGA ATAATCCAGT AGTGCAATTA ATCACCATCT CTGCCGATGA AGCCGGTCAG
CGGATCGATA ACTTTTTACT CGCCAAATTG AAAGGTGTGC CAAAAAGTAT GATCTACCGC
ATCGTGCGTA AAGGTGAGGT TCGCGTTAAT AAAGGGCGCA TTAAGCCAGA GTATAAACTG
GCTGACGGTG ATGTGGTGCG CGTACCCCCG GTACGTGTGG CAGAACGAGA AGAGGTGCAG
GTATCCGCCA AACTGGATAA AGTGGCCGCG TTGGCTGATT GTATCTTGTT TGAAGATGAT
TACCTGTTGG TACTGAATAA ACCTTCAGGG ACGGCGGTGC ATGGGGGCAG TGGTTTGAGC
TTCGGTGTTA TTGAGGGGTT GCGTGCATTG CGCCCTGAAG CCCGCTTCCT GGAACTTGTT
CACCGTTTAG ACCGTGACAC CTCGGGTGTC TTATTGGTTG CTAAAAAGCG CTCAGCATTG
CGCTCCTTAC ACGAACAGTT GCGCTTAAAG AGTATGCAGA AAGACTATCT GGCGTTGGTC
CGGGGCCAAT GGCAGTCTCA CTGCAAAGCA ATTCAGGCCC CTTTGCTGAA GAATATTATG
CAAAGCGGTG AACGGGTCGT GAAGGTCAGC AGCGAAGGCA AACCCTCAGA GACGCGCTTT
AAAATCGAAG AGCGTTTCGA ACATGCCACG CTGGTTAAAG CCAGCCCAGT GACTGGCCGG
ACGCATCAAA TCCGTGTCCA TGCATTACAT GCAGGCCACC CGATTGCCTT TGATGACCGT
TACGGTGATC GTGAGTTTGA TCAACAATTA CAAGGCACTG GGCTGCATCG TTTATTCCTT
CATGCTGCTG CATTACGTTT TGAACATCCC AATACCGGTG CGACGATGCG GATCGAAGCC
CCCTTGGATA ACCAGTTGCG TCACTGTTTG CTGGCCTTGC GTAAGAACGC CACCGTAAAA
TAA
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| Protein sequence | MKTNNPVVQL ITISADEAGQ RIDNFLLAKL KGVPKSMIYR IVRKGEVRVN KGRIKPEYKL
ADGDVVRVPP VRVAEREEVQ VSAKLDKVAA LADCILFEDD YLLVLNKPSG TAVHGGSGLS
FGVIEGLRAL RPEARFLELV HRLDRDTSGV LLVAKKRSAL RSLHEQLRLK SMQKDYLALV
RGQWQSHCKA IQAPLLKNIM QSGERVVKVS SEGKPSETRF KIEERFEHAT LVKASPVTGR
THQIRVHALH AGHPIAFDDR YGDREFDQQL QGTGLHRLFL HAAALRFEHP NTGATMRIEA
PLDNQLRHCL LALRKNATVK
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