Gene YPK_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1628 
Symbol 
ID6088163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1805723 
End bp1806124 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content49% 
IMG OID641596698 
ProductXRE family transcriptional regulator 
Protein accessionYP_001720374 
Protein GI170023869 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCACA TTGATTCGTT GTGTGCAGGT ATGGATATGT CAGCATTTGC AGAGCGCCTT 
CGCCTGTTGC TTGAAGCCCG TAATCTTAGT CAGGTCAGAC TTTCAGAACT TCTGGGCGTT
GATCCCTGTG CCTATAACCG CTGGGAGAAA GGCGCTACTG CGCCTCACCT AGATACGGTG
ATTAAAATTG CCGATGTGCT ACAGGTGACG CTGGATGAAC TGGTGGGCCG TAAGGCTGTT
TCGGAAGAAG TAAAGATCCA CAACCATACG CTGCATACCC TGTGGCAGAA GGCAGATATG
TTGCCGGATT CCGATCAGCA GCCATTGATT GCCGTGCTGG ACAGTTTTGT TAAGAAGTCG
ATGGTTGAAC AGGTAATTGG ATTTAACAGT AACAGACGTT AA
 
Protein sequence
MSHIDSLCAG MDMSAFAERL RLLLEARNLS QVRLSELLGV DPCAYNRWEK GATAPHLDTV 
IKIADVLQVT LDELVGRKAV SEEVKIHNHT LHTLWQKADM LPDSDQQPLI AVLDSFVKKS
MVEQVIGFNS NRR