Gene YPK_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1604 
Symbol 
ID6089040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1773960 
End bp1774457 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content52% 
IMG OID641596674 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001720350 
Protein GI170023845 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.386581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCA GAACCGCAAC GCCCGCCGAT TTTGCTGAGA TATGGCCTCT GTTCCAGGCG 
GTTATCCGCA GCGGTGACAC CTACGTTTTC ACGCCCGAAA CACCCGAGCA AGATGCGTAT
GATTACTGGT TTGGTCGCGG CGTTCGCTGC TGGGTTGCAG TACACGAGCA GCGCATCGTC
GGTATGTATA AATTAATCGA TAACCAGCGC GGCCTTGGTG CCCATGTAGC GAATGCTTCA
TTTATGGTTG ATCAGAAAGT GCGCGGGCTT GGCATTGGCA AGGCCCTTGG CCTACATTGT
ATTGACCAGG CCACCACGCT CGGTTACCGG GCGATTCAGT TTAATTTTGT CGTCAGCACG
AATACACTGG CCGTCGCGTT GTGGCAAAAA TTGGGCTTCA AAATTATTGC TACACTGCCT
GAAGCGTTTA ACCATCGCCA ACTCGGTTAT GTCGATGCCT ATGTGATGCA TCGGGTTCTG
GTGCCAACTC AGTCCTAA
 
Protein sequence
MEIRTATPAD FAEIWPLFQA VIRSGDTYVF TPETPEQDAY DYWFGRGVRC WVAVHEQRIV 
GMYKLIDNQR GLGAHVANAS FMVDQKVRGL GIGKALGLHC IDQATTLGYR AIQFNFVVST
NTLAVALWQK LGFKIIATLP EAFNHRQLGY VDAYVMHRVL VPTQS