Gene YPK_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1589 
Symbol 
ID6090824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1757206 
End bp1758909 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content57% 
IMG OID641596659 
Product2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 
Protein accessionYP_001720335 
Protein GI170023830 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 
TIGRFAM ID[TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACAA GTGTTTTTAA CCGTCGTTGG GCGGCACTGC TACTGGAGGC TTTGACCCGC 
CACGGTGTGC GTCATATCTG TATTGCCCCA GGGTCTCGCT CTACACCGTT AACGTTAGCG
GCTGCCGCTA ATCCGTCGTT GGTTTGCCAT ACCCATTTTG ATGAGCGCGG TCTGGGCCAT
CTGGCTCTGG GGCTGGCGAA GGCCTCAACA GAACCGGTGG CGGTCATTGT CACCTCGGGT
ACGGCGGTGG CGAATCTTTA TCCTGCGCTA ATCGAAGCGG GGTTAACGGG TGAGCGGTTG
ATATTATTGA CCGCTGATCG CCCACCGGAG TTAATCGATT GCGGTGCCAA TCAGGCTATC
CGCCAGCAGG GGCTGTTTGC CAGCCATCCA ACCCTAAGTG TTAATCTCCC CAGACCGACG
CCCGATATCT CTGCCCGTTG GTTGGTTTCC ACACTCGACA GCGCGATGGC GCAATTGCAA
CATGGCGCTT TGCACATTAA TTGTCCCTTT GCTGAACCAC TGTATGGGGG GGATGAGCAA
CAGTATGCCG ACTGGTCTGC CTCGCTGGGC GATTGGTGGC AGGATTGTCA CCCATGGCTG
CGTCAAACCT GTTACCCGCC CTCTCTTTAT CAACCACTTG CACAGCAAGC TGACTGGTTT
TTCTGGCGGC AAAAACGTGG AGTCGTGATT GCCGGGCGGA TGGGCGCGGA AGAGGGCCGG
CAACTGACTG CATGGGCTGC AATGCTGGGC TGGCCACTGA TTGGCGATGT ATTGTCACAA
ACGGGTCAGC CATTGCCTTG TGCTGACTTA TGGCTGGCGC ACCCACGGGC GCAAGAAACC
CTCGCTCAAG CACAGATTGT GTTGCAATTT GGCAGCAGTC TGACCAGTAA GCGCCTTTTG
CAATGGCAGA CTGCATGTCA GCCACAGGAA TACTGGCTGG TGGATAGCGC CCCAGGCCGC
CTTGATCCTG CTAATCATCG TGGCCGACGT ATTATTTGCC CGGTAGGCGA GTGGTTGAGT
CGGCACCCCG CGCAGCGGCG TACACCTTGG GCCACAGAAC TGGCGGTGTA TTCGGAAAGT
GCGCAAGCAC AGGTGATCGA GACGCTGTCC GGCCAATTCA GTGAGGCCGC CGTGGCACAT
CAGCTCGCGG AATTATTACC GGATAACGGC CAGCTATTTG TTGGCAACAG TTTGATTGTC
CGGTTGATTG ATGCGCTGGG GCAGCTACCC GCAGGCTATC CGGTTTACAG CAATCGGGGG
GCCAGTGGTA TCGATGGTTT GCTGTCAACC GCCGCCGGTG TACAGCGCGC GACGGCGAAA
CCGACATTAG CTATCGTCGG TGATTTGTCT GCCTTATATG ACCTTAATGC GCTGGCACTT
TTGCGCCAGA GCTCGGCACC GATGGTGCTA CTGGTGATCA ATAACAATGG GGGGCAGATT
TTCTCTTTAT TGCCAACCCC AGAGGCCGAG CGCCAGCGTT TCTACTGTAT GCCGCAGGAT
GTGAACTTCG AACACGCAGC GGTTATGTTC AGCTTAGGTT ATGCCCGGCC TAATAGCTGG
CCTCAGCTAC GGGAGCACGT GCATCAATGC TGGCTACGGG GGGGAACCAC GCTGATTGAA
GTCCAGGTGC CACCAAGTCA GGGGGCAGAA ACACTGCAAC AGTTAGTACA ACAGGTGACA
TTAATACCGC AGGTGGCCCC ATGA
 
Protein sequence
MSTSVFNRRW AALLLEALTR HGVRHICIAP GSRSTPLTLA AAANPSLVCH THFDERGLGH 
LALGLAKAST EPVAVIVTSG TAVANLYPAL IEAGLTGERL ILLTADRPPE LIDCGANQAI
RQQGLFASHP TLSVNLPRPT PDISARWLVS TLDSAMAQLQ HGALHINCPF AEPLYGGDEQ
QYADWSASLG DWWQDCHPWL RQTCYPPSLY QPLAQQADWF FWRQKRGVVI AGRMGAEEGR
QLTAWAAMLG WPLIGDVLSQ TGQPLPCADL WLAHPRAQET LAQAQIVLQF GSSLTSKRLL
QWQTACQPQE YWLVDSAPGR LDPANHRGRR IICPVGEWLS RHPAQRRTPW ATELAVYSES
AQAQVIETLS GQFSEAAVAH QLAELLPDNG QLFVGNSLIV RLIDALGQLP AGYPVYSNRG
ASGIDGLLST AAGVQRATAK PTLAIVGDLS ALYDLNALAL LRQSSAPMVL LVINNNGGQI
FSLLPTPEAE RQRFYCMPQD VNFEHAAVMF SLGYARPNSW PQLREHVHQC WLRGGTTLIE
VQVPPSQGAE TLQQLVQQVT LIPQVAP