| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1576 |
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| Symbol | |
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| ID | 6090029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1742830 |
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| End bp | 1743699 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641596646 |
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| Product | gluconate 5-dehydrogenase |
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| Protein accession | YP_001720322 |
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| Protein GI | 170023817 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.106738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTAT TTACGACGTC TTTACGATCT GCCTGTTCTC TCCGTCGCGG GCACTTTGTC
AATAACCTCA TTATTTTTAT ATATTATCGC TATCAGGAAG TGACCATGAA GAATCTATTT
TCGTTGGAAA ATCGCAAAGT ATTAATTACT GGCTCTGCAC AGGGTATTGG ATTCTTACTG
GCAAAAGGGT TAGCTGAATT TGGCGCAGAG ATTATCATTA ACGATATCAC CGCAGAGCGT
GCTGAAAAAG CCGTGGCTGA ATTACGTGCT AGCGGCTTTA TCGCCCATGC CGCCGCATTT
AACGTGACGA ACCATGATGA AGTCAATGAA GCTATCGAGA AAATAGAAAG CCATATTGGT
GCTATCGACG TGTTAATTAA TAATGCCGGT ATCCAACGCC GCCATGCCTT TACCGAATTC
CCAGAAAAAG ATTGGGATGA TGTGATTGCT GTTAATCAGA AATCGGTATT TTTAGTTTCA
CAAGCCGTTG CCCGTTATAT GATTAAACGC CAACGTGGAA AAATTATTAA TATCTGTTCA
ATGCAAAGTG AATTAGGCCG CGATACGATC ACCCCATATG CCGCCTCTAA AGGGGCAGTT
AAAATGCTGA CCCGTGGGAT GTGTGTCGAA CTGGCTCGCT ACAATATTCA GGTTAACGGT
ATTGCACCGG GTTATTTCAA AACGGATATG ACAAAAGCAC TGGTCGATGA TCAAGCCTTT
ACCGATTGGT TGTGTAAACG CACACCTGCC GCCCGTTGGG GAGATCCAGA AGAGCTCATT
GGTGCAGCGG TTTATTTGTC ATCCAAAGCC TCTGACTTTG TTAATGGTCA TTTGCTGTTT
GTTGATGGTG GCATGCTGGT AGCCGTTTAA
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| Protein sequence | MDVFTTSLRS ACSLRRGHFV NNLIIFIYYR YQEVTMKNLF SLENRKVLIT GSAQGIGFLL
AKGLAEFGAE IIINDITAER AEKAVAELRA SGFIAHAAAF NVTNHDEVNE AIEKIESHIG
AIDVLINNAG IQRRHAFTEF PEKDWDDVIA VNQKSVFLVS QAVARYMIKR QRGKIINICS
MQSELGRDTI TPYAASKGAV KMLTRGMCVE LARYNIQVNG IAPGYFKTDM TKALVDDQAF
TDWLCKRTPA ARWGDPEELI GAAVYLSSKA SDFVNGHLLF VDGGMLVAV
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