Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1521 |
Symbol | |
ID | 6090707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1683587 |
End bp | 1684282 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641596591 |
Product | aspartate racemase |
Protein accession | YP_001720267 |
Protein GI | 170023762 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1794] Aspartate racemase |
TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00121722 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAA TTTTAGGCCT TATTGGTGGC ATGAGTTGGG AATCAACCAT TCCCTATTAC AGAATGATTA ACCAGCACGT TAAAGCACAA TTAGGCGGCT TACACAGCGC TAAAATTATT CTCTACAGTG TGGACTTTCA TGAGATTGAA CAGCTTCAGG CAAAAGGTGA CTGGCAAACA GCCGCTCAAT TACTCTCTAA TGCCGCTATC TCATTAAAAC ATGCTGGCGC GGAGGTTATC GTGGTGTGCA CCAATACCAT GCACAAAGTG GCCGATGATA TTGAAGCAGC CTGCGGGTTG CCCTTACTGC ACATTGCTGA TGCCACTGCC GTCCAAATTA AACAACAAGG AATAGATAAG ATCGGTCTAT TAGGGACCCG CTATACCATG GAGCAAGACT TTTACCGTGG CCGTTTAACA GAAAAACACG GCATTGAGGT TATCACTCCA GACGATACAG ACCGAGAGGC AGTTAACCGT ATTATTTATG AAGAGCTCTG CTTGGGGATC ATCAGTGAAA CCTCCCGGGA TGCCTATCGC CGGGTGATAA AGAAACTCGA AGCACAGGGT GTGCAAGGGA TTATTTTTGG GTGTACCGAA ATCACGCTAC TGGTTAACGC GCAAGATGCC TCAGTACCGG TGTTTGATAC CACAGCGATA CATGCCAGCG CCGCGGCTGA TTACGCACTG CAATAA
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Protein sequence | MMKILGLIGG MSWESTIPYY RMINQHVKAQ LGGLHSAKII LYSVDFHEIE QLQAKGDWQT AAQLLSNAAI SLKHAGAEVI VVCTNTMHKV ADDIEAACGL PLLHIADATA VQIKQQGIDK IGLLGTRYTM EQDFYRGRLT EKHGIEVITP DDTDREAVNR IIYEELCLGI ISETSRDAYR RVIKKLEAQG VQGIIFGCTE ITLLVNAQDA SVPVFDTTAI HASAAADYAL Q
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