| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1506 |
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| Symbol | |
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| ID | 6087925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1666697 |
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| End bp | 1667962 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641596576 |
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| Product | long-chain fatty acid outer membrane transporter |
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| Protein accession | YP_001720252 |
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| Protein GI | 170023747 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0138985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGA AAAACCTGTT TACCCGCTCA GCTCTGGCAG CAGCTATCGC TCTTATTTCA
TCGAACGTTT CTGCAGCCGG TTTTCAGTTG AATGAATATT CAGCCGCCGC TCTAGGGCGT
GCTTTCTCTG GTGAAGGCGC AGTGGCTGAT AATGCTTCCG TTGGTAGCCG CAATCCTGCA
GCAATGACTT TATTCGACCG CCCTTCTTTC TCCGGTGGTG TGATTTATAT TGATCCAAGT
GTTGATATCA CGGGGACGTC GCCAAGTGGC AAAAGTACGG ATGCCAGTAA CATTGCGCCA
TCAGCGTGGG TTCCGAATCT CCACTTTATT ATGCCATTGG ATGAACAGTG GGCAATCGGT
GCTTCTGCGA CCTCTAACTA CGGTTTAGCC ACTGAATTTA ATGATGATTA TGCGGCAGGC
ATGTTAGGCG GCCAAACCGA TCTGAAAACG GCTAACCTCA ACCTAAGTGC CGCGTACCGC
CTGAATGATA ACTTCAGTTT TGGCCTGGGG TTTGATGCAG TCTATGCTGA TGCGAAAATT
GTGCGCCATC TCGGTGAAGC TGGCGGGGGT CTATTGCCTG CTAACACTGA AGCCGCCAGG
TTGGAAGGTA CCAAATGGGG TTACGGCTGG AATGCGGGTA TTTTGTATGA AATCGATAAA
GAAAACCGCT ACAGCTTCAC TTATCGTTCT GAAGTCAATA TCGATTTTGA CGGTGATTAC
AGTAACCAAC TACCTGTTAT TTTCGGTGGT CTGGGTGGAA AAACGGTCCC TGGTTCCCTA
ACTCTGAACC TGCCCGCCGT GTGGGAAGTC TCCGGCTACA ATAAAGTCGC GCCACAATGG
GCCATTCACT ACAGCATGGC TTACACCACC TGGAGCAGTT TCAAGGAGTT AAAAGCAACC
GCGTCTAATG GCGATGTGCT GTTTGATAAA CATGAAGGCT TCAGAGATGC CTACCGTATT
GCGTTAGGGA CCACCTATTA CTACGATGAT AACTGGACAT TCCGCACCGG TATTGCCTTT
GATGATAGCC CGATCCCCGC AGGAAACCGT TCAATTTCCA TCCCGGACCA AGATCGTTTC
TGGCTCAGTG CAGGTACCAC CTACGCCTTC AACAAAAATG CCTCTGTTGA TGTCGGTATT
GCTTATATGA AAGGCCAGAA TGTCAGTATT ACCGAAAAGA CCCCGGCCCC ATCTAACACC
ACATATGAGT TCAACTCGAA AGGTTCCGCG ATGCTATACG GTGTGAACTT CAACTACACA
TTCTAA
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| Protein sequence | MNQKNLFTRS ALAAAIALIS SNVSAAGFQL NEYSAAALGR AFSGEGAVAD NASVGSRNPA
AMTLFDRPSF SGGVIYIDPS VDITGTSPSG KSTDASNIAP SAWVPNLHFI MPLDEQWAIG
ASATSNYGLA TEFNDDYAAG MLGGQTDLKT ANLNLSAAYR LNDNFSFGLG FDAVYADAKI
VRHLGEAGGG LLPANTEAAR LEGTKWGYGW NAGILYEIDK ENRYSFTYRS EVNIDFDGDY
SNQLPVIFGG LGGKTVPGSL TLNLPAVWEV SGYNKVAPQW AIHYSMAYTT WSSFKELKAT
ASNGDVLFDK HEGFRDAYRI ALGTTYYYDD NWTFRTGIAF DDSPIPAGNR SISIPDQDRF
WLSAGTTYAF NKNASVDVGI AYMKGQNVSI TEKTPAPSNT TYEFNSKGSA MLYGVNFNYT
F
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