Gene YPK_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1490 
Symbol 
ID6090470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1652892 
End bp1653371 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content44% 
IMG OID641596559 
Producttype VI secretion system lysozyme-related protein 
Protein accessionYP_001720236 
Protein GI170023731 
COG category[S] Function unknown 
COG ID[COG3518] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03357] type VI secretion system lysozyme-related protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.237539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA AAAAACAGTT TTTACCGGCG TTGTTAGAGC GTTTACTCGA TGATGAGCCT 
AAAAAGCATA TTGAGCCTCA CGATAAATTC TTTTATGACT CACGGACGAT GCGGAAATTG
GTACAACGTA ATATTTCAGA GATATTAAAT AATGCCAATA TTGAAGACCG GTTGGATCCG
CAGCGTCATA AATGGGTAGC GACGTCGGTC TTAAACTATG GTATTTCACC CTTGGTTGGG
CTTTATGCCG TGCCGCATAA TTGGGCGACT ATTGAACGAA TTATCAGAGA GGCCATTATC
CGTTTTGAAC CACGGATAAT GGCGGAATCT CTCGTTGTCA GCCAGCAACT CCAGGCCAGG
AATGGCATTA TACAGTTTGA GATTAGGGGG TTAATCAAAT GGAACCCGCA CCCTATCGAT
CTTTGTATTG AAGGTGCCTA TGACGTTGAG ACGGATAACG CAGAGCTACG CGCCCGTTGA
 
Protein sequence
MEKKKQFLPA LLERLLDDEP KKHIEPHDKF FYDSRTMRKL VQRNISEILN NANIEDRLDP 
QRHKWVATSV LNYGISPLVG LYAVPHNWAT IERIIREAII RFEPRIMAES LVVSQQLQAR
NGIIQFEIRG LIKWNPHPID LCIEGAYDVE TDNAELRAR