Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1490 |
Symbol | |
ID | 6090470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1652892 |
End bp | 1653371 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641596559 |
Product | type VI secretion system lysozyme-related protein |
Protein accession | YP_001720236 |
Protein GI | 170023731 |
COG category | [S] Function unknown |
COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.237539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGA AAAAACAGTT TTTACCGGCG TTGTTAGAGC GTTTACTCGA TGATGAGCCT AAAAAGCATA TTGAGCCTCA CGATAAATTC TTTTATGACT CACGGACGAT GCGGAAATTG GTACAACGTA ATATTTCAGA GATATTAAAT AATGCCAATA TTGAAGACCG GTTGGATCCG CAGCGTCATA AATGGGTAGC GACGTCGGTC TTAAACTATG GTATTTCACC CTTGGTTGGG CTTTATGCCG TGCCGCATAA TTGGGCGACT ATTGAACGAA TTATCAGAGA GGCCATTATC CGTTTTGAAC CACGGATAAT GGCGGAATCT CTCGTTGTCA GCCAGCAACT CCAGGCCAGG AATGGCATTA TACAGTTTGA GATTAGGGGG TTAATCAAAT GGAACCCGCA CCCTATCGAT CTTTGTATTG AAGGTGCCTA TGACGTTGAG ACGGATAACG CAGAGCTACG CGCCCGTTGA
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Protein sequence | MEKKKQFLPA LLERLLDDEP KKHIEPHDKF FYDSRTMRKL VQRNISEILN NANIEDRLDP QRHKWVATSV LNYGISPLVG LYAVPHNWAT IERIIREAII RFEPRIMAES LVVSQQLQAR NGIIQFEIRG LIKWNPHPID LCIEGAYDVE TDNAELRAR
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