| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1489 |
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| Symbol | |
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| ID | 6089918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1652021 |
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| End bp | 1652827 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641596558 |
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| Product | virulence protein SciE type |
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| Protein accession | YP_001720235 |
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| Protein GI | 170023730 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4455] Protein of avirulence locus involved in temperature-dependent protein secretion |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.747548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCA CGAATTTAAC TGAGTTATTA AAAAGCGCGT CTTTAACCGA AATGCTGGCC
GATGTCATTG CTACGATAAA AGCTAAACCA ACGGATACCG ATACGCGAGA ACTGTTATTC
AAACTCTATT GTATTGATGG TTCATGGCAA AAAGCCCTAT TGCAGCTTGA AACATTGACA
CAGCTTTTAC CTGAGTTCAC CAAACAGGCT GAACTCTATA AAAATCTGAT ATTGAGTGAG
AAAATGCGTG ATGAAGTACT GGCAGGCAAA CGCAGCCCTG GTACGTTGGG TAACGACCTG
CCTGAATGGG TAGCCTTGTT GCAACAAGCT AATCAACTCC ACCATGATGG CGATCATCAG
CAAAGTGAGG CCCTCCGTGA ACAGGCTCTG CAACAGGCAC CGGAAAGTAT CGGAGAGAGC
GCTGCGACAG GCTGCTTCGC TTGGATTGCT GACAGTGATG GGCGTATGGG GCCTGTTTGT
GAGTTTATTA GCGCCGGCGG TTACCGTTGG GTCCCGTTTG CAGAGATACA ATCACTCACT
GTTTCCAAAC CTAAAAATAT TACAGACCTG ATATGGGCGC CGGCACAGGT TAAAGTAAAG
GATAAAGTTT GGTACGGTTA TATACCTGCC CGCTATCCAC TGACACCTGA AACAGACAAT
GAAACTAAAC TGGGTCTTAA AACAGAATGG CATCAACCGA CTGACTCACT TTATATTGGG
GCAGGGCGGA AAATGTTTAT CACCGACCAA GGTGAGCATG CGCTGTTTGA TATTGAAGAG
ATTGTATTTG AGATAGATTG TATTTGA
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| Protein sequence | MNTTNLTELL KSASLTEMLA DVIATIKAKP TDTDTRELLF KLYCIDGSWQ KALLQLETLT
QLLPEFTKQA ELYKNLILSE KMRDEVLAGK RSPGTLGNDL PEWVALLQQA NQLHHDGDHQ
QSEALREQAL QQAPESIGES AATGCFAWIA DSDGRMGPVC EFISAGGYRW VPFAEIQSLT
VSKPKNITDL IWAPAQVKVK DKVWYGYIPA RYPLTPETDN ETKLGLKTEW HQPTDSLYIG
AGRKMFITDQ GEHALFDIEE IVFEIDCI
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