Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1480 |
Symbol | |
ID | 6089360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1638004 |
End bp | 1639506 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641596549 |
Product | EvpB family type VI secretion protein |
Protein accession | YP_001720226 |
Protein GI | 170023721 |
COG category | [S] Function unknown |
COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACTC AAGACGCAAA AACTAAACAA GCTACAGTCG CCAGTGCGAC GGAATATAGC GATTTTAATA CATTACTGAC TAAAGAATTT AAAGCGAAGT CTGAGCAGAC GATAGCAGCA GTAGAAGGTG CCGTTAAAAC GTTGGCTGAG CAAGCGCTGG CTAATTCGGT CACGGTGTCA GACGATGCTT ATAAAAGCAT TGCTTCCATT ATTGCAGAGA TTGATCGCAA GCTATCAGAT CAGATTAATT TAATTTTGCA CCACCAAGAA TTCCAGTCTC TGGAAAGCGC ATGGCGTGGG CTACACTATT TAGTCAATAA CACCGAGACT GATGAGAAGT TGAGATTACG TTTCCTCGAC ATCTCTAAAG ATGAATTACG CCGTAACATG AAGCGTTATA AAGGTGTTGC TTGGGATCAA AGCCCATTAT TCAAAAAAAT CTATGAAGAA GAATATGGCC AACTGGGTGG CGAACCATAC GGTTGCCTGG TAGCAGACTA TTACTTTGAC CATACTGCAC CTGACGTTGA CTTGTTGGCT TCAATTGGCA AAGTTGCCGC GTCTGCCCAC GTGCCATTTA TTACAGGTGC TGCACCGTCT GTGTTGCAAA TGGAATCTTG GCAAGAACTG TCAAACCCAC GTGATTTGAC GAAGATCTTC ACTCAGAATC TTGAGTATGC CGCATGGAAC TCACTGCGTC AGTCTGAAGA CTCTCGCTAT ATCGGCCTGG CGATGCCACG TTTCTTGTCG CGTCTGCCTT ATGGGATTAA TACCAACCCG GTAGATGCCT TCCATTTTGA AGAGACGACG GATGGCGCGG ATCACAGCAA ATATGTGTGG TCAAATGCGG CTTATGCGAT GGCTGTTAAC ATCAACCGAT CTTTCAAAGA GTATGGCTGG TGTACGCTGA TTCGTGGGGT GGAAAGTGGT GGTGTTGTTG AAGGCCTGCC ATGCCATACC TTCCCGACGG ATGACGGCGG TATTGATATG AAATGCCCAA CAGAAATCGC TATTTCTGAC CGTCGTGAAG CGGAACTGGC CAAGAATGGT TTTATTCCAC TGGTTCACAG AAAGAATACT GATTACGCGG CATTCATTGG CGCGCAGTCC CTGCAAAAAC CTGCAGAATA TTACGATTCG GATGCAACGG CGAACGCCAA CCTTTCCGCT CGTCTGCCAT ACCTGTTTGC TTGTTCACGT TTTGCACATT ATCTGAAGTG CATCGTGCGT GACAAAATCG GCTCTTTCAA AGAGCGTGAT GAGATGCAAC GTTGGTTGAA TGACTGGGTG ATGAACTATG TTGATGGTGA CCCGGCTAAC TCTTCTCTGG AAACTAAAGC GCGCCGTCCT TTAGCCGCTG CTGAAGTGAT TGTTGAAGAA GTTGAAGGTA ACCCTGGTTA CTATCAGGCT AAATTCTTCT TACGCCCTCA TTTCCAGTTA GAAGGTTTGA CAGTCTCCCT GCGTATGGTT GCTAAACTGC CTTCGCTGAA AGACGTAGCA TAA
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Protein sequence | MSTQDAKTKQ ATVASATEYS DFNTLLTKEF KAKSEQTIAA VEGAVKTLAE QALANSVTVS DDAYKSIASI IAEIDRKLSD QINLILHHQE FQSLESAWRG LHYLVNNTET DEKLRLRFLD ISKDELRRNM KRYKGVAWDQ SPLFKKIYEE EYGQLGGEPY GCLVADYYFD HTAPDVDLLA SIGKVAASAH VPFITGAAPS VLQMESWQEL SNPRDLTKIF TQNLEYAAWN SLRQSEDSRY IGLAMPRFLS RLPYGINTNP VDAFHFEETT DGADHSKYVW SNAAYAMAVN INRSFKEYGW CTLIRGVESG GVVEGLPCHT FPTDDGGIDM KCPTEIAISD RREAELAKNG FIPLVHRKNT DYAAFIGAQS LQKPAEYYDS DATANANLSA RLPYLFACSR FAHYLKCIVR DKIGSFKERD EMQRWLNDWV MNYVDGDPAN SSLETKARRP LAAAEVIVEE VEGNPGYYQA KFFLRPHFQL EGLTVSLRMV AKLPSLKDVA
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