Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1474 |
Symbol | |
ID | 6088377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1629626 |
End bp | 1632283 |
Gene Length | 2658 bp |
Protein Length | 885 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641596543 |
Product | type VI secretion ATPase |
Protein accession | YP_001720220 |
Protein GI | 170023715 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTATTA CAAGGAAACA TCTCTTCGGC AAGCTGGACG CCACTCTTTT CAAAGGTATT GAAAGCGCAA CAACGATTTG TAAATTACGC GGCAATCCTT ACGTAGAGTT AGTTCACTGG TTGAATCAGC TTTGGCATCA GGAAGATAAC GACCTTAAGC AGATTATTCG GTATTTTGCG GTGGATGTGG ATGCCTTTGA GCGTGAGCTG GCTCAGGCAC TTGCGAAGTT ACCTGTCGGG GCAACTAGCA TTTCAGATTT TTCGTATCAT ATTGAGTTGG CCACGGAACG GGCTTGGATC TATGCCAGCC TGGAGTGTTT AGATACCCGT ATCCGGAGTG GACACCTGCT GCTTGCGCTA TTAACAACAA TGGAACTGCG GAGAGCTTTC TTTGCGATTG CGCCAAGCAT GGAAAAAATT CCATTAGAGC ATTTAAGCAA AGATTTGAAC TTCATTACGC AGGCATCACC AGAAGCGAAT GAAGCAGCCA GTGATGGCAG CCCGTTGTAC GATGGAGCTT TACCTGGCGA AGCCAGTAAT GCCATCGGTG CGGCAAAAAG TGGTGGCACA CTGGCTCAAT ACACCACAGA CCTCACGGCA TTAGCACGTG AAGGCAAGAT AGATCCGGTA TTGGGACGTA ATCACGAAAT CAACACAATG GTTGATATTC TCTTGCGCCG TCGGCAGAAC AACCCATTAC TGACCGGTGA CGCAGGGGTG GGTAAAACCG CCATTGTTGA AGGGCTAGCA TTGGCCATTG CTGCAGGCTC AATGCCGCCA GCATTAAGCC AGGTAAGCCT GTTGTCATTA GATATTGTGG CGCTCTCAGC GGGTGCCAGC ATGAAAGGTG AATTTGAAGC GCGCCTGAAG AGTGTCTTGG ATGAAGCAAT CGCGGCAGAA AAGCCCGTTA TTTTGTTTAT CGATGAAGTC CACACACTTA TTGGCGCGGG TGGCAATGCC GGGACCGGCG ATGCGGCGAA CTTATTGAAA CCTGCATTGG CGCGTGGCCA ATTACGTACC ATTGGTGCGA CAACGTGGAG CGAGTTCAAG CGTCACATTG AGAAGGATCC GGCACTCACC CGTCGTTTCC AAGTACTTCA AGTTGATGAG CCCGATGAGA ACACGGCGAT CTCCATGTTA CGGGGCCTGA TACCTGCGCT AGAAAAGCAC CATGGCGTGT GGATTATGGA CGAAGCCTTA CAGGCGGCAG TACGGTTGTC TCATCGTTAT ATCCCTGCGC GTCAGTTGCC GGATAAAGCG ATAAGTCTGC TTGATACGGC TTGTGCCCGG ATCGCTGTTG CACAGCATTC ACAACCAATA GAGTTGCAGC ACTTAACCTT CCAGAGTGAG ACCGCGCAAA CTGAGCTGGT TTCCTTAGAG AAAGCGCGGC ACTTTGGTAA AGCGCAGGAT GCGCGTACTG AGCAGTTGAA AACATCCATT GCTGAACATG GCGAGGCTGC AGATAAACTT GATCAGCGTT GGCAGGCAGA ACGCGAATTG GTATCAGCGA TTACGACCAT AAGAACCGCA CTTTATGACT TGGTTTCTCA GCCAGAGCCT GATGAGGAAA AACGTCGGGC TTATCAAGCG CAATTAGTCC AGTTGGAAGC GCAGCTTTCT CAGGTTCGCA CTTCACTGCC GTTAGTGCAG ACAGAAGTCA ACGCTGAAGT GATCGCCAGT ATCGTTGCAG ATTGGACCGG CATCCCGGTT GGGCAAATGC TCAAAGACGA TATTCGGGCG GTAATGGAGT TGCCACAGCG CCTTGAAGCA CGTGTTATTG GTCAGCCCCA TGCATTGATG CAACTGGGTG AGAATATTAT GACCGCACGC GCCGGTCTGT CAGACCCAAG GAAACCATTG GGGGTCTTTA TGTTAGTGGG GCCTTCAGGT GTGGGTAAAA CAGAGACGGC CTTAGCGATT GCCGAGAGCA TGTATGGTGG TGAACAGAAT ATGATCACTA TCAATATGAG CGAATATCAG GAATCGCATA CCGTTTCCTC TTTAAAAGGT TCTCCACCGG GATATGTTGG ATACGGTGAA GGCGGTGTAT TAACGGAAGC CGTGCGCCGT AAGCCATATA GTGTTGTGTT ATTAGATGAA ATCGAAAAAG CGCACTCTGA TGTACATGAA TTATTCTTCC AAGTGTTTGA TAAAGGCCAA ATGGAAGATG GTGAAGGGCG CTTTATCGAT TTCAAAAACA CTATTTTGCT GTTAACCAGT AATGTGGGCA GCGAGTTACT GAGTAACTTA TTAGCTGATC CAGATACTGC ACCGGATCAG GATGGAATAT TAACTGCGTT ACAACCTGAA TTGCTGAAAG TTTTCCCAGC AGCATTTTTA GGGCGAGTCA CGGTTATTCC TTATCTTCCG TTACAGCAAG ATGCATTGCA GCACATTGTA CGGTTACATC TTGACCGGAT TGGCGCTCGT TTATACTCGC AGCATCAATT GACACTGAAA TACAGTGATG AAGTGGTTGA CGATGTTGTT AGCCGCTGTG CGGTTTCAGA AACCGGTGCA CGTATGCTGA TCCGTTACAT TGAACAAAAT ATTACGCCAA AAATAGGTAA ATATATTTTA GGTGATAGTG ATGTGAAGCC TGAGCAAATT ATTTTCGTTC ATAAAAATGA AAATGGATTC GTGATCGCTT TACAATGA
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Protein sequence | MAITRKHLFG KLDATLFKGI ESATTICKLR GNPYVELVHW LNQLWHQEDN DLKQIIRYFA VDVDAFEREL AQALAKLPVG ATSISDFSYH IELATERAWI YASLECLDTR IRSGHLLLAL LTTMELRRAF FAIAPSMEKI PLEHLSKDLN FITQASPEAN EAASDGSPLY DGALPGEASN AIGAAKSGGT LAQYTTDLTA LAREGKIDPV LGRNHEINTM VDILLRRRQN NPLLTGDAGV GKTAIVEGLA LAIAAGSMPP ALSQVSLLSL DIVALSAGAS MKGEFEARLK SVLDEAIAAE KPVILFIDEV HTLIGAGGNA GTGDAANLLK PALARGQLRT IGATTWSEFK RHIEKDPALT RRFQVLQVDE PDENTAISML RGLIPALEKH HGVWIMDEAL QAAVRLSHRY IPARQLPDKA ISLLDTACAR IAVAQHSQPI ELQHLTFQSE TAQTELVSLE KARHFGKAQD ARTEQLKTSI AEHGEAADKL DQRWQAEREL VSAITTIRTA LYDLVSQPEP DEEKRRAYQA QLVQLEAQLS QVRTSLPLVQ TEVNAEVIAS IVADWTGIPV GQMLKDDIRA VMELPQRLEA RVIGQPHALM QLGENIMTAR AGLSDPRKPL GVFMLVGPSG VGKTETALAI AESMYGGEQN MITINMSEYQ ESHTVSSLKG SPPGYVGYGE GGVLTEAVRR KPYSVVLLDE IEKAHSDVHE LFFQVFDKGQ MEDGEGRFID FKNTILLLTS NVGSELLSNL LADPDTAPDQ DGILTALQPE LLKVFPAAFL GRVTVIPYLP LQQDALQHIV RLHLDRIGAR LYSQHQLTLK YSDEVVDDVV SRCAVSETGA RMLIRYIEQN ITPKIGKYIL GDSDVKPEQI IFVHKNENGF VIALQ
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