| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1472 |
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| Symbol | |
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| ID | 6089395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1625937 |
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| End bp | 1626962 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641596541 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001720218 |
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| Protein GI | 170023713 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCCCG ATGAATCCGT TCACCAGGAA AAACATGCCA ATCTGGACGC CTGGTATCAG
GAGTCTCAGC CATGGAACGC CGGTTTTATC AGCATGATGC GGGCGAATGC CGCCCGCACC
CCTACCCTGC CAGCGCCAGG AAAAGCGCCC TTGCCTGAAC AGGAAGCCTT CCGCATCGGG
CAAAGTGCGC ACATGACGTT CTCTCCGCGT GAGATATCTC ATGCGGTTAT GAAAGACGGG
AAAATGGATC TGCAACTTTT TGGCTTAGGG ATTTGGGGGC CAAATGGTGC GATGCCGCTT
CAGATGACCG AACTGGCCTA TACCCGTGCC GAGTTGCATG ATCATACGAT GACGGACTTC
GTCGACCTTT TTCATCACCG CGCATTATCA CAGCTTTATC GGGCGTGGTT TGTCTCTCAG
GATACCGCCT CGCTAGACCG GCAGAGTGAT GAAAAATTCT CCTTCTATGT CGGTAGTCTG
GCCGGGCTGG ATCCTCAAGA ACTTAATGAC ACCGAACTCC CGGTTCATGC CCGGTTAGCC
TCCTCTGCCC ATTTGATTCG TGAAGCGCGC AACCCCGAAG GGCTCGTGGG CGCATTGCAG
TATTACTTTG ACGTCCCCGT GCGGATGGTG GAGTACGCCG AGCAGTGGAT CTTTCTGGAA
GAAAGCGACC AGACACAATT GGGTGATGGT GCCGGCGCGA TGCTCTTGGG CGACGGTGCT
ATTTTGGGCA ATACCGTTTT GGATCGGCAG CATAAATTTC AACTGATCCT CGGCCCCCTC
AGCCTGCAAC AGTACCTGCG CTTTAGCCTC TGGGGACAAG ACTTACCAGT ATTGCGAGAG
TGGGTACGTA ACTTTGTTGG GTTCGAATAC GCCTGGGAAG TCCAGTTGTT GTTAAGCGCC
GATGAGGTTC CCATGGCAAC ACTCGATGGC GGACATCAAT TGGGATACAC CTCTTGGTTA
GCCCGCAGTG ATACCACCCT TGATGTCGGT GGGATGAGTT TTGAGCCTGA AATGCATCAC
GATTAA
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| Protein sequence | MLPDESVHQE KHANLDAWYQ ESQPWNAGFI SMMRANAART PTLPAPGKAP LPEQEAFRIG
QSAHMTFSPR EISHAVMKDG KMDLQLFGLG IWGPNGAMPL QMTELAYTRA ELHDHTMTDF
VDLFHHRALS QLYRAWFVSQ DTASLDRQSD EKFSFYVGSL AGLDPQELND TELPVHARLA
SSAHLIREAR NPEGLVGALQ YYFDVPVRMV EYAEQWIFLE ESDQTQLGDG AGAMLLGDGA
ILGNTVLDRQ HKFQLILGPL SLQQYLRFSL WGQDLPVLRE WVRNFVGFEY AWEVQLLLSA
DEVPMATLDG GHQLGYTSWL ARSDTTLDVG GMSFEPEMHH D
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