Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1449 |
Symbol | |
ID | 6087519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1601142 |
End bp | 1601813 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641596518 |
Product | curli production assembly/transport component CsgG |
Protein accession | YP_001720195 |
Protein GI | 170023690 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGAA AAATATTTTT AAGCACGATG TTTATAACCG CTTTTTTATT AAGTGGGTGT GCTACCGAAT CATCACGTTC CCTTGAAGTG GCAAAGGTCG CCTCTTATGG CACCCAATAT AATGGCCCAC GTAGCCCTAT TTCTGTCGGT AAGTTTGATA ATCGCTCCAG CTATATGAGT GGGTTGTTCT CCGATGGGGT AGACCGCTTG GGGAATCAAT CCAAAACCAT TCTGGTGACA CATTTACAAC AAACGGGGCG CTTTAACGTG TTAGAGCGTA CCAATATGGA AGAACTTAAA AACGAAGCCG CTATTTCAGG GAAAAGCCAG CAACTAAAAG GTGCCACCTA CGTGGTGACG GGTGACGTGA CTGAGTTTGG CCGCAAAGAA ACCGGGGATC GTCAACTGTG GGGCATTTTG GGTCGTGGTA AATCTCAGGT GGCTTATGCC AAGGTCAATC TGAATATCGT TAATGTTAAT ACCTCCGAAG TGGTGTTCTC TTCACAGGGG GCGGGTGAGT ACGAACTGTC TAACCGTGAA GTGATCGGTT TTGGTGGTAC TGCCAGTTAC GATTCGACGC TGAATGGCAA AGTGCTGGAT TTAGCAATTC GTGAAGCCGT GAACAACTTG GTCGCAGGTA TTGAATCTGG TGCATGGCAA CCCGCGCAAT AA
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Protein sequence | MKRKIFLSTM FITAFLLSGC ATESSRSLEV AKVASYGTQY NGPRSPISVG KFDNRSSYMS GLFSDGVDRL GNQSKTILVT HLQQTGRFNV LERTNMEELK NEAAISGKSQ QLKGATYVVT GDVTEFGRKE TGDRQLWGIL GRGKSQVAYA KVNLNIVNVN TSEVVFSSQG AGEYELSNRE VIGFGGTASY DSTLNGKVLD LAIREAVNNL VAGIESGAWQ PAQ
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