Gene YPK_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1449 
Symbol 
ID6087519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1601142 
End bp1601813 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID641596518 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_001720195 
Protein GI170023690 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGAA AAATATTTTT AAGCACGATG TTTATAACCG CTTTTTTATT AAGTGGGTGT 
GCTACCGAAT CATCACGTTC CCTTGAAGTG GCAAAGGTCG CCTCTTATGG CACCCAATAT
AATGGCCCAC GTAGCCCTAT TTCTGTCGGT AAGTTTGATA ATCGCTCCAG CTATATGAGT
GGGTTGTTCT CCGATGGGGT AGACCGCTTG GGGAATCAAT CCAAAACCAT TCTGGTGACA
CATTTACAAC AAACGGGGCG CTTTAACGTG TTAGAGCGTA CCAATATGGA AGAACTTAAA
AACGAAGCCG CTATTTCAGG GAAAAGCCAG CAACTAAAAG GTGCCACCTA CGTGGTGACG
GGTGACGTGA CTGAGTTTGG CCGCAAAGAA ACCGGGGATC GTCAACTGTG GGGCATTTTG
GGTCGTGGTA AATCTCAGGT GGCTTATGCC AAGGTCAATC TGAATATCGT TAATGTTAAT
ACCTCCGAAG TGGTGTTCTC TTCACAGGGG GCGGGTGAGT ACGAACTGTC TAACCGTGAA
GTGATCGGTT TTGGTGGTAC TGCCAGTTAC GATTCGACGC TGAATGGCAA AGTGCTGGAT
TTAGCAATTC GTGAAGCCGT GAACAACTTG GTCGCAGGTA TTGAATCTGG TGCATGGCAA
CCCGCGCAAT AA
 
Protein sequence
MKRKIFLSTM FITAFLLSGC ATESSRSLEV AKVASYGTQY NGPRSPISVG KFDNRSSYMS 
GLFSDGVDRL GNQSKTILVT HLQQTGRFNV LERTNMEELK NEAAISGKSQ QLKGATYVVT
GDVTEFGRKE TGDRQLWGIL GRGKSQVAYA KVNLNIVNVN TSEVVFSSQG AGEYELSNRE
VIGFGGTASY DSTLNGKVLD LAIREAVNNL VAGIESGAWQ PAQ