Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1401 |
Symbol | |
ID | 6089795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1545255 |
End bp | 1545956 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641596465 |
Product | N-acetylmannosamine-6-phosphate 2-epimerase |
Protein accession | YP_001720148 |
Protein GI | 170023643 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3010] Putative N-acetylmannosamine-6-phosphate epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.10861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAATC TAAATAATCT CCGCCACAAG CTCCAAAATG GCCTTATCGC CTCATGTCAA CCGGTTCCCG GCAGTGCCAT GGATACGCCT GAGATCGTCG CGGCAATGGC CTGTGCCGCA CTGGCGGGCG GTGCTGTCGG TCTACGGATT GAAGGCATCA ACAACATCCG GGCAGTACGT CGGGCTACAG ATGCCCCCAT TATTGGCATT ATTAAACGCG ACTTGCCTGA CTCCGAGGTC AGAATTACCC CTTGGCTGGA AGATATCGAT GCACTAAGTG CCGCCGGAGC AGATATTATT GCTTTTGATG TTACCTGCCG TGAGCGCCCA GTCTCCGTGG CCGATTTATA TCAGCGAGCG CGGGCAACCG GCTGCCTGAC CATGGCCGAT GCCTCCAATA TTGACGACGG CCTGTTAGCT CATCATCTGG GGATTGATTT TATCGGCACC ACCCTTTCCG GCTACACTCA AGCCACCGTG CCAACCGAGC CCGATCTGGC CTTAGTGACA CAGTTAGCGC AAGCCGGGTG CAGGGTCATT GCCGAAGGCC GTTACCATTC ACCGGCCCTG GCGGCGGCGG CAATATCCGC GGGGGCATAT GCCGTTACGG TCGGTTCCGC CATTACCCGT ATAGAACATA TTTGCGGTTG GTTTTGCGAT GCAATTAAGC AGTGTGAAAC AGAAAAACTG ACCGAATACT GA
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Protein sequence | MSNLNNLRHK LQNGLIASCQ PVPGSAMDTP EIVAAMACAA LAGGAVGLRI EGINNIRAVR RATDAPIIGI IKRDLPDSEV RITPWLEDID ALSAAGADII AFDVTCRERP VSVADLYQRA RATGCLTMAD ASNIDDGLLA HHLGIDFIGT TLSGYTQATV PTEPDLALVT QLAQAGCRVI AEGRYHSPAL AAAAISAGAY AVTVGSAITR IEHICGWFCD AIKQCETEKL TEY
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