Gene YPK_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1401 
Symbol 
ID6089795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1545255 
End bp1545956 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content55% 
IMG OID641596465 
ProductN-acetylmannosamine-6-phosphate 2-epimerase 
Protein accessionYP_001720148 
Protein GI170023643 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3010] Putative N-acetylmannosamine-6-phosphate epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.10861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAATC TAAATAATCT CCGCCACAAG CTCCAAAATG GCCTTATCGC CTCATGTCAA 
CCGGTTCCCG GCAGTGCCAT GGATACGCCT GAGATCGTCG CGGCAATGGC CTGTGCCGCA
CTGGCGGGCG GTGCTGTCGG TCTACGGATT GAAGGCATCA ACAACATCCG GGCAGTACGT
CGGGCTACAG ATGCCCCCAT TATTGGCATT ATTAAACGCG ACTTGCCTGA CTCCGAGGTC
AGAATTACCC CTTGGCTGGA AGATATCGAT GCACTAAGTG CCGCCGGAGC AGATATTATT
GCTTTTGATG TTACCTGCCG TGAGCGCCCA GTCTCCGTGG CCGATTTATA TCAGCGAGCG
CGGGCAACCG GCTGCCTGAC CATGGCCGAT GCCTCCAATA TTGACGACGG CCTGTTAGCT
CATCATCTGG GGATTGATTT TATCGGCACC ACCCTTTCCG GCTACACTCA AGCCACCGTG
CCAACCGAGC CCGATCTGGC CTTAGTGACA CAGTTAGCGC AAGCCGGGTG CAGGGTCATT
GCCGAAGGCC GTTACCATTC ACCGGCCCTG GCGGCGGCGG CAATATCCGC GGGGGCATAT
GCCGTTACGG TCGGTTCCGC CATTACCCGT ATAGAACATA TTTGCGGTTG GTTTTGCGAT
GCAATTAAGC AGTGTGAAAC AGAAAAACTG ACCGAATACT GA
 
Protein sequence
MSNLNNLRHK LQNGLIASCQ PVPGSAMDTP EIVAAMACAA LAGGAVGLRI EGINNIRAVR 
RATDAPIIGI IKRDLPDSEV RITPWLEDID ALSAAGADII AFDVTCRERP VSVADLYQRA
RATGCLTMAD ASNIDDGLLA HHLGIDFIGT TLSGYTQATV PTEPDLALVT QLAQAGCRVI
AEGRYHSPAL AAAAISAGAY AVTVGSAITR IEHICGWFCD AIKQCETEKL TEY