Gene YPK_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1400 
Symbol 
ID6089421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1544299 
End bp1545192 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content49% 
IMG OID641596464 
Productdihydrodipicolinate synthetase 
Protein accessionYP_001720147 
Protein GI170023642 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.13834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TAACCGGCCT GATCGCAGCT CCGCACACTC CCTTTGATGA ACAGGGCGAG 
GTCAATTATC CGGTCATTGA CCAAATTGCC GAGCATCTGA TCAATGATGG CGTGAAAGGC
GTTTATGTCT GTGGTACCAC TGGCGAAGGC ATTCATTGCT CAGTTGATGA GCGCAAGAAA
ATTGCTGAAC GCTGGGTAAA CGCCGCTCAA GGCAAACTGA GCATTACCTT ACACACCGGT
GCTCTCAGTA TTAAAGATGC GGTTGATCTC TCTCGTCATG CGGAAACACT GGATATCTTC
GCAACCTCAG CCATCGGCCC CTGTTTCTTT AAACCGGGTA ATCTGGATGA CCTAATCGCT
TATTGTCAGG CAATAGCCGC GGCAGCACCG TCGAAGGGCT TCTATTACTA CCACTCCGGT
ATGTCCGGTG TAAATTTGGA CATGGAACAG TTTCTGATCA AAGCGGAATC CAAGATCCCT
AACTTGTCAG GAATTAAATT CAATAACGCT GATTTGTATG AGTTTCAACG CTGTTTACGT
GTGAGTGGCG GTAAATTTGA TATTCCGTTT GGCGTTGATG AACATCTGCC AGGTGGATTA
GCTGTAGGGG CTATTGGCGC TGTTGGCAGC ACTTATAACT ATGCCGCTCC GCTGTTCCAT
AAAATTATCG CTGACTTTAA TGCGGGTGAT CAGGTTGCGG TACAGCGTGG AATGGATCAC
GTTATCGCCC TGATCCGTGT GCTGGTCGAA TTCGGTGGTG TTGCCGCCGG TAAGGCCGCG
ATGCAATTAC ATGGTATTGA TGCCGGTAAC CCACGTCTGC CACTGCGTGC CTTGACCAAA
GAACAGAAGC AAACCGTGGT TAACAGAATG CGTGACGCTA TTACGTTGCA GTAA
 
Protein sequence
MKKLTGLIAA PHTPFDEQGE VNYPVIDQIA EHLINDGVKG VYVCGTTGEG IHCSVDERKK 
IAERWVNAAQ GKLSITLHTG ALSIKDAVDL SRHAETLDIF ATSAIGPCFF KPGNLDDLIA
YCQAIAAAAP SKGFYYYHSG MSGVNLDMEQ FLIKAESKIP NLSGIKFNNA DLYEFQRCLR
VSGGKFDIPF GVDEHLPGGL AVGAIGAVGS TYNYAAPLFH KIIADFNAGD QVAVQRGMDH
VIALIRVLVE FGGVAAGKAA MQLHGIDAGN PRLPLRALTK EQKQTVVNRM RDAITLQ