| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1389 |
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| Symbol | |
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| ID | 6087151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1531879 |
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| End bp | 1532478 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641596453 |
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| Product | cytochrome c-type protein NapC |
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| Protein accession | YP_001720136 |
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| Protein GI | 170023631 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.701394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGA CTAAAAAACC CGGTTTTATC CGTCGGTTAT GGCAGTGGTG GCGTAGACCA
AGTCGTCTGG CACTCGGTAC CTTACTGCTG ATTGGTTTTG TCAGTGGCAT TATCTTCTGG
GGCGGTTTTA ATACCGGGAT GGAAATGGCG AATACCGAAA AATTCTGTAT CAGTTGCCAT
GAGATGAAAG ATAACGTCTA TGAGGAATAC ATGAGTACCA TTCACTACAG CAACCGCAGT
GGCGTGAAAG CAACCTGCCC CGATTGCCAC GTACCCCATG AGTGGGGGCC TAAAATGGTA
CGTAAGATTA AAGCCAGTAA AGAGCTGTAT GCCAAAGCCT TTGGTTTGAT TGATACACCG
CAGAAATTTG ACGCTCATCG CCTGACGATG GCAGAAAGTG AGTGGGCGCG GATGAAAGCC
AATGATTCGC AAGAATGTCG CAACTGTCAT AATTTCGATA ATATGGATTT CAGCGCACAA
AAAACGGTGG CGGCGAAAAT GCACAGCCAA GCCATTACTG AAGGTAAAAC CTGTATTGAT
TGCCATAAAG GGATTGCCCA TAAGTTGCCG GATATGAAAG ATGTACCTAT TGGTTTTTAG
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| Protein sequence | MSETKKPGFI RRLWQWWRRP SRLALGTLLL IGFVSGIIFW GGFNTGMEMA NTEKFCISCH
EMKDNVYEEY MSTIHYSNRS GVKATCPDCH VPHEWGPKMV RKIKASKELY AKAFGLIDTP
QKFDAHRLTM AESEWARMKA NDSQECRNCH NFDNMDFSAQ KTVAAKMHSQ AITEGKTCID
CHKGIAHKLP DMKDVPIGF
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