Gene YPK_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1379 
Symbol 
ID6091017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1519180 
End bp1520355 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content39% 
IMG OID641596443 
Productradical SAM domain-containing protein 
Protein accessionYP_001720126 
Protein GI170023621 
COG category[R] General function prediction only 
COG ID[COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATCA CGGCTAAACC AACCAGCTAC CAGTGTAATT TAAAGTGTGA TTACTGCTTT 
TATCTCAGTA AAGAAAACAT TTTTCAGCAC AAAGGTTGGA TGACTGAAGA AACCCTTGAA
ACATTTATCG AGCGATATAT CAGTACATCG GGGCATGATG TGTATTTCAC TTGGCAAGGG
GGTGAGCCTA CCATGGCTGG GCTGGATTTC TTTGAGAAAG CGATACAGTA TCAGAACCGC
TATAAAGGGA CTAAAAAAAT ACACAACGCT TTACAAACTA ACGGTATTTT ATTAGATGAT
GCATGGTGTC TCTTTCTAAG AGAAAATCAT TTTTTAGTCG GTGTGTCTAT TGATGGCCCT
AAAGAGTTAC ACGATCGCTA CCGTGTGACT CGCTCAGGCA AAGGATCGTT TGATAAAGTG
ATGGCAGGTA TTGAGCAACT CAAAAAACAT CAGGTAGAGT TCAATACATT AACCGTGATA
AATCGTATCA ACGTAAAATA CCCCCTTGAA GTTTATCGAA CGTTAAAATC TATCGGTGCT
AAACATATCC AATTTATTGA ACTGTTGGAA ACAACCGAGC CTAATATTGA TTTTTCAAAT
CAAAAAAGCA CGTTTGAACT TATTGAGTTC ACTGTCCCTG CGGTTGATTA TGGCCATTTC
ATGGCGGAGG TCTTCAAAGA ATGGGTTCGC CATGATGTAG GAACTCTCTT TATTCGCCAG
TTTGAGTCTT TTGTCAGCCG ATTTATTGGC AATGGGCACA CGAGCTGTGT TTTCCAAAAA
TCGTGCAAAA ATAATTTTGT GATGGAGTCC AATGGTGACA TTTATGAATG TGATCACTTT
GTCTACCCTG AGTATAAAAT AGGCAATATT TACCACGATA AATTGGATTC GTTGGCGAGC
GATAAATTAT CCGCGCAAAA AGAGGTGCTA TCTGAGTCAT GCCGTAAGTG TATGTATAAA
GCCATTTGCT ATGGCGGTTG CCCAAAACAT AGGATTGATC AGGACAGCGA TGGGATGAAA
TCCTATTTTT GCGCAGGGTA TAAAATACTC TTCTCGGTTA TGGTGCCTTA TATGAATGCG
CTGGCTGAAT TAGAAAAAAA TGGTATTCCA TTGGATAAGA TCATGGGTAT CGTCGATGAC
ATTGAAGGTG GAATAAAATC ACAACAGCAG CATTAA
 
Protein sequence
MHITAKPTSY QCNLKCDYCF YLSKENIFQH KGWMTEETLE TFIERYISTS GHDVYFTWQG 
GEPTMAGLDF FEKAIQYQNR YKGTKKIHNA LQTNGILLDD AWCLFLRENH FLVGVSIDGP
KELHDRYRVT RSGKGSFDKV MAGIEQLKKH QVEFNTLTVI NRINVKYPLE VYRTLKSIGA
KHIQFIELLE TTEPNIDFSN QKSTFELIEF TVPAVDYGHF MAEVFKEWVR HDVGTLFIRQ
FESFVSRFIG NGHTSCVFQK SCKNNFVMES NGDIYECDHF VYPEYKIGNI YHDKLDSLAS
DKLSAQKEVL SESCRKCMYK AICYGGCPKH RIDQDSDGMK SYFCAGYKIL FSVMVPYMNA
LAELEKNGIP LDKIMGIVDD IEGGIKSQQQ H