| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1335 |
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| Symbol | |
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| ID | 6088386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1471646 |
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| End bp | 1472935 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641596399 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001720082 |
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| Protein GI | 170023577 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCACC GTGAATTGGA ACAACGCAGA AAAGAGGCGA CCCCACGTGG GATTGGTGTG
TTATGTGATT TCTATGCGGT ACGGGCTGAA AATGCCACGC TGTGGGATGA ACAGGGTCGG
GAATATATCG ATTTTACGGC GGGTATTGCG ACACTCAATA TCGGACACCG CCACCCGAAA
GTGATGGCCG CTGTGCGCCA ACAACTGGAC CAGTTTACCC ATACTGCCTA TCAGGTGGTG
CCTTACGCCA GTTATGTCAC ATTGGCAGAG AAAATTAATT CGCTAGCCCC TATTTCTGAT
TCAAATAAGA CGGCAGCGGG CAACAGTAAA ACCGCTTTTT TCACCACTGG GGTCGAAGCA
ATAGAAAATG CCGTGAAAAT AGCGCGTGCG GCGACTGGCC GCCCCGGTGT GATTGCTTTC
TCCGGGGCAT TTCATGGCCG AACCTTATTG GCGATGGCGC TGACCGGTAG AGCGGTGCCG
TACAAAGTCG GTTTTGGTCC GTTCCCTGCC TCCATTTTTC ATGCCCTCTA TCCCAATGAG
TTGTATGGCG TGAGTGTCGA AGAGGCCATC AACAGTGTTG AGCGCCTGTT TCGTTGTGAT
ATCAGTCCGA CACAAGTGGC GGCCATTCTA TTTGAGCCGA TTCAGGGCGA GGGCGGTTTT
AATATCGCCC CGCCGGAATT TGTCAGTGCT TTGCGCACCC TGTGTGATGA GCACGGTATT
TTGCTGATTG CCGATGAAGT ACAAACGGGG TTTGCCCGTA CAGGTAAGTT ATTTGCCATG
GAATATTATC CCGACACCAA AGTTGATGTG ATCACCATGG CGAAAAGCCT TGGGGGCGGT
ATGCCAATTT CCGCGGTCAC GGGGCGGGCC GACATTATGG ATGCCCCGTT GCCGGGGAGT
TTGGGCGGTA CTTATGCCGG TAACCCACTG GCGGTGGCTG CGTCACTGGC GGTGCTCGAT
ATTATTGCGG AAGAGAAGTT ATGCGAGCGC GCCCTGATTT TAGGCGCGAA GTTGGTCGAC
GTACTGGAAA AAGCCCAAAT GAGCAATGCG GCCATTGTGG GCATTCGTGC GCGTGGATCC
ATGGTGGCGG TGGAATTTAA CGATCCCGTC AGCGGTAAAC CGTCACCAGA ACTGACGCGC
GCCTATCAAC GTCAGGCACT GGAAGAGGGG CTGTTACTCC TGAGTTGCGG TGTCCACAGC
AACGTGATCC GCTTCCTCTA CCCATTGACC ATTCCCGACA AGCAATTTAA ACAGGCGATG
AATATTCTTA CCCGCCTACT GGCGAGCTAA
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| Protein sequence | MSHRELEQRR KEATPRGIGV LCDFYAVRAE NATLWDEQGR EYIDFTAGIA TLNIGHRHPK
VMAAVRQQLD QFTHTAYQVV PYASYVTLAE KINSLAPISD SNKTAAGNSK TAFFTTGVEA
IENAVKIARA ATGRPGVIAF SGAFHGRTLL AMALTGRAVP YKVGFGPFPA SIFHALYPNE
LYGVSVEEAI NSVERLFRCD ISPTQVAAIL FEPIQGEGGF NIAPPEFVSA LRTLCDEHGI
LLIADEVQTG FARTGKLFAM EYYPDTKVDV ITMAKSLGGG MPISAVTGRA DIMDAPLPGS
LGGTYAGNPL AVAASLAVLD IIAEEKLCER ALILGAKLVD VLEKAQMSNA AIVGIRARGS
MVAVEFNDPV SGKPSPELTR AYQRQALEEG LLLLSCGVHS NVIRFLYPLT IPDKQFKQAM
NILTRLLAS
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