| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1276 |
|---|
| Symbol | |
|---|
| ID | 6089650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1403716 |
|---|
| End bp | 1404945 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641596344 |
|---|
| Product | cysteine desulfurase |
|---|
| Protein accession | YP_001720027 |
|---|
| Protein GI | 170023522 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00157162 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAT CAAAAGTAAA GACACCGATC TATCTGGATT ATGCAGCAAC GACGCCAGTA
GATCCGCGTG TCGCTGAAAA AATGATGCAG TATCTCACTC TGGACGGTAT CTTCGGTAAC
CCAGCCTCAC GTTCGCATAA GTTTGGTTGG CAGGCAGAAG AAGCTGTTGA TATTGCACGT
AATGACGTCG CCGCATTGGT GGGTGCAGAC CCTCGTGAGA TCGTCTTCAC CTCCGGTGCG
ACCGAGTCTG ATAACCTCGC TATTAAAGGT GCTGCTAATT TCTATCAGAA GAAAGGCAAG
CACATCATCA CTTGTAAAAC CGAACATAAA GCGGTGTTGG ATAGCTGTCG CCAATTGGAG
CGTGAAGGCT TCGAAGTGAC TTATCTGGCA CCGCAGCCTA ACGGTATTAT CGATCTGAAA
CAGCTTGAAG CGACAATGCG TGAAGACACC ATTTTGGTTT CTATCATGCA TGTGAATAAT
GAGATCGGTG TGGTACAGGA TATCGCTGAA ATCGGCGAAA TGTGCCGTAG TCGCGGGATC
ATTTTCCACG TTGATGCTAC ACAAAGCGTC GGTAAATTAC CTGTTGATCT GAGTAAACTG
AAAGTCGATT TGATGTCCTT CTCTGCCCAT AAAGTTTATG GCCCGATGGG CATTGGCGCA
CTGTTTGTTC GCCGTAAACC CCGTATTCGT ATTGAAGCAC AGCAGCACGG CGGTGGTCAT
GAGCGCGGTA TGCGTTCAGG CACCTTGCCT GTGCACCAAA TCGTTGGGAT GGGTGAAGCT
TACCGCATTG CCAAAGAAGA GATGGAAAGC GAAGCTGCAC GTCTGCGTTC ACTGCGTTTG
CGTTTGTGGA ACGGCATCAA AGATATCGAA GAAGTTTACC TGAACGGCTC ATTAGAGAAT
GGCGCTCCTG GCATTCTGAA CGTCAGCTTC AACTATGTTG AAGGTGAGTC GTTGATCATG
GCACTGAAAG ATTTGGCTGT CTCATCAGGT TCAGCCTGTA CCTCTGCGAG TTTGGAGCCT
TCTTACGTGT TGCGTGCGTT GGGGATGAAC GACGAACTGG CTCACAGTTC AATTCGTTTC
TCTCTGGGGC GTTTCACCAC AGAAGAAGAG ATCGACTACG CCATTGCGCT GGTACATAAA
TCCATTGGTC GTCTGCGTGA TTTATCCCCA TTGTGGGATA TGTTCAAGCA GGGCGTGGAT
ATCAGCAGCA TTGAATGGTC CCATCATTAA
|
|---|
| Protein sequence | MTESKVKTPI YLDYAATTPV DPRVAEKMMQ YLTLDGIFGN PASRSHKFGW QAEEAVDIAR
NDVAALVGAD PREIVFTSGA TESDNLAIKG AANFYQKKGK HIITCKTEHK AVLDSCRQLE
REGFEVTYLA PQPNGIIDLK QLEATMREDT ILVSIMHVNN EIGVVQDIAE IGEMCRSRGI
IFHVDATQSV GKLPVDLSKL KVDLMSFSAH KVYGPMGIGA LFVRRKPRIR IEAQQHGGGH
ERGMRSGTLP VHQIVGMGEA YRIAKEEMES EAARLRSLRL RLWNGIKDIE EVYLNGSLEN
GAPGILNVSF NYVEGESLIM ALKDLAVSSG SACTSASLEP SYVLRALGMN DELAHSSIRF
SLGRFTTEEE IDYAIALVHK SIGRLRDLSP LWDMFKQGVD ISSIEWSHH
|
|---|
| |