Gene YPK_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1265 
SymbolglyA 
ID6088719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1394116 
End bp1395369 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content49% 
IMG OID641596333 
Productserine hydroxymethyltransferase 
Protein accessionYP_001720016 
Protein GI170023511 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000077829 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGC GTGAAATGAA CATTGCCGAT TACGATGCAG ATCTGTGGCG TGCAATGGAG 
CAAGAAGTCG TGCGTCAGGA AGAACACATC GAACTGATTG CGTCTGAGAA CTACACCAGC
CCGCGTGTTA TGCAAGCGCA GGGATCTCAG TTAACGAACA AATATGCTGA AGGCTATCCA
GGCAAGCGTT ATTACGGTGG CTGTGAATAT GTTGATGTTG TTGAACAATT GGCAATCGAT
CGCGCTAAAG CATTATTTGG TGCTGATTAC GCAAACGTTC AACCTCATTC TGGTTCGCAA
GCTAACGTTG CTGTTTACTC CGCGCTGCTG AAACCCGGTG ACACCGTATT GGGGATGAAT
CTGGCACACG GCGGTCACTT GACGCATGGT TCACCAGTGA ACTTCTCCGG CAAACTCTAC
AACATTGTCC CCTATGGTAT TGATGAGTCG GGTCAAATTG ATTATGAAGA TCTGGCACGT
CAGGCAGAAA TACATAAACC CAAAATGATT ATCGGTGGCT TCTCCGCCTA TTCTGGTATC
GTTGATTGGG CAAAAATGCG TGAAATCGCC GACAGCATTG ACGCCTGGTT CTTTGTTGAT
ATGGCTCATG TTGCTGGTCT GGTTGCTGCG GGGGTTTATC CTAACCCGGT TCCACATGCC
CACATCGTTA CCACCACGAC GCACAAGACT CTGGCTGGCC CACGTGGCGG TTTGATTCTG
GCGAAAGGGG GCGATGAAGA CTTGTACAAA AAACTGAACT CTTCTGTTTT CCCTGGTAAC
CAGGGTGGCC CATTGATGCA TGTTATCGCA GGTAAAGCGG TCGCGCTGAA AGAAGCAATG
GAACCTGAGT TTAAAATTTA CCAACAGCAA GTGGCTAAAA ATGCGAAAGC CATGGTGGCG
GTGTTCTTGG AGCGCGGTTA CAAAGTGGTT TCTGGTGGTA CGGATAACCA CCTGTTCTTG
CTGGATTTGG TGGATAAAGA CATCACCGGT AAAGACGCTG ATGCGGCTTT AGGCCGTGCG
AATATCACCG TGAACAAAAA CAGCGTACCT AACGATCCGA AGAGCCCGTT TGTGACATCT
GGTGTGCGTA TTGGTAGCCC AGCGATCACC CGCCGTGGCT TCAAAGAAGC GGAATCCCGT
GAATTGGCTG GCTGGATGTG TGATGTGTTA GATAACATCA ACGATGAAGC GACCATTGAG
CGTGTGAAAC AGAAAGTTCT GGCTATCTGC GCTCGTTTAC CGGTTTACGC ATAA
 
Protein sequence
MLKREMNIAD YDADLWRAME QEVVRQEEHI ELIASENYTS PRVMQAQGSQ LTNKYAEGYP 
GKRYYGGCEY VDVVEQLAID RAKALFGADY ANVQPHSGSQ ANVAVYSALL KPGDTVLGMN
LAHGGHLTHG SPVNFSGKLY NIVPYGIDES GQIDYEDLAR QAEIHKPKMI IGGFSAYSGI
VDWAKMREIA DSIDAWFFVD MAHVAGLVAA GVYPNPVPHA HIVTTTTHKT LAGPRGGLIL
AKGGDEDLYK KLNSSVFPGN QGGPLMHVIA GKAVALKEAM EPEFKIYQQQ VAKNAKAMVA
VFLERGYKVV SGGTDNHLFL LDLVDKDITG KDADAALGRA NITVNKNSVP NDPKSPFVTS
GVRIGSPAIT RRGFKEAESR ELAGWMCDVL DNINDEATIE RVKQKVLAIC ARLPVYA