Gene YPK_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1190 
Symbolera 
ID6088140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1326470 
End bp1327381 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content46% 
IMG OID641596258 
ProductGTP-binding protein Era 
Protein accessionYP_001719941 
Protein GI170023436 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.442285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAG TAGAAAAAAC GTATTGTGGT TTTATTGCCA TTGTAGGGCG CCCGAATGTA 
GGCAAATCGA CCTTACTAAA TGAGCTGTTG GGGCAAAAAA TCTCCATCAC CTCACGTAAA
CCGCAAACCA CACGTCACCG TATTATGGGG ATCCACACTG AAGGGCCTTA TCAGGCTATT
TATGTTGATA CCCCTGGGCT GCATATTGAA GAAAAACGTG CCATTAACCG CTTAATGAAT
CGTGCGGCAA GTAGCTCTCT TGGTGATGTG GAATTAGTCA TTTTTGTGGT TGAAGGTACT
CATTGGACTG CTGATGACGA GATGGTGGTT AATAAGCTGC GCAGTTTGCA ATGCCCGGTA
TTATTGGCCA TCAACAAAGT GGATAACGTA ACGGATAAAA CCAAGTTATT ACCGCATATG
CAGTTCCTTA GCCAGCAGAT GAACTTCCTG GACGTTGTGC CAATCTCAGC TGAGAAGGGA
ATGAATGTTG ATACCATCGC CAGCATTGTG CGCAAGCATA TGCCGGAAGC TGAACATCAC
TTCCCAGAGG ATTACATCAC TGACCGTTCC CAGCGTTTTA TGGCGTCGGA AATTATTCGT
GAAAAGTTGA TGCGTTTCCT GGGCGAAGAA CTGCCTTATT CGGTGACGGT TGAGATTGAG
CAGTTCGTGC CGAATGAACG TGGTGGCTAT AATATCCATG GTCTGATTTT GGTTGAGCGC
GAAGGCCAAA AGAAAATGGT TATCGGCAAC AAAGGCAGCA AAATCAAAGT AATCGGTACC
GAAGCCCGTC AGGACATGGA GCGGATGTTT GAAGCTAAAG TGCATCTTGA ACTGTGGGTG
AAAGTGAAAT CAGGCTGGGC AGATGACGAA CGTGCATTGC GCAGCTTAGG CTATACCGAC
GATTTGAAAT AA
 
Protein sequence
MSEVEKTYCG FIAIVGRPNV GKSTLLNELL GQKISITSRK PQTTRHRIMG IHTEGPYQAI 
YVDTPGLHIE EKRAINRLMN RAASSSLGDV ELVIFVVEGT HWTADDEMVV NKLRSLQCPV
LLAINKVDNV TDKTKLLPHM QFLSQQMNFL DVVPISAEKG MNVDTIASIV RKHMPEAEHH
FPEDYITDRS QRFMASEIIR EKLMRFLGEE LPYSVTVEIE QFVPNERGGY NIHGLILVER
EGQKKMVIGN KGSKIKVIGT EARQDMERMF EAKVHLELWV KVKSGWADDE RALRSLGYTD
DLK