Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1173 |
Symbol | |
ID | 6090423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1310736 |
End bp | 1311422 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641596241 |
Product | uracil-DNA glycosylase |
Protein accession | YP_001719924 |
Protein GI | 170023419 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0255291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCCCT CCCTTACTTG GCACGATGTA ATCGGCCAAG AAAAAGAACA ACCGTATTTT AAAGATACGC TGGCCTATGT GGCAGCAGAA CGCCGTGCGG GTAAGACCAT CTATCCACCA CAAAAAGATA TATTTAACGC TTTTCGCCTG ACCGAACTGG ATCAAGTAAA AGTCGTCATT CTGGGGCAAG ATCCGTATCA CGGCCCCAAC CAGGCTCATG GATTATCATT TTCGGTTCTA CCTGGTGTTC CTGCCCCCCC TTCATTGGGG AATATATACA AGGAACTGGT CACTGATATT CCAGGATTCC AGCGCCCTAA CCACGGTTTT TTACAAAGCT GGGCCGAGCA AGGCGTTTTA TTACTTAATA CGGTCCTGAC GGTAGAAGCG GGCAAAGCCC ACTCTCATGC TAACCTTGGC TGGGAAACCT TTACGGATAG AGTGATTGCT GCGTTGAATG AACACCGAGA AGGTGTGATT TTTATGTTGT GGGGATCACA TGCTCAGAAA AAAGGCCGCA TTATTAATAC TGAGCGCCAT TATATTTTGA AAGCACCCCA TCCATCACCC TTGTCAGCAC ACCGTGGTTT TCTGGGCTGT AAGCACTTTT CGCAAGCTAA TCAATTACTG CAACAACAAA ATCAGCAGCC TATTGATTGG CAACCTAAGC TGCCAGCGGT GGAGTAA
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Protein sequence | MSPSLTWHDV IGQEKEQPYF KDTLAYVAAE RRAGKTIYPP QKDIFNAFRL TELDQVKVVI LGQDPYHGPN QAHGLSFSVL PGVPAPPSLG NIYKELVTDI PGFQRPNHGF LQSWAEQGVL LLNTVLTVEA GKAHSHANLG WETFTDRVIA ALNEHREGVI FMLWGSHAQK KGRIINTERH YILKAPHPSP LSAHRGFLGC KHFSQANQLL QQQNQQPIDW QPKLPAVE
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