Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1116 |
Symbol | nrdF |
ID | 6090225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1256086 |
End bp | 1257057 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641596184 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | YP_001719867 |
Protein GI | 170023362 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTAG TAAAACCAAT AACACGTATC AGCGCCATCA ACTGGAATAA AATTGAAGAC GATAAAGATC TGGAAGTGTG GAACCGCCTG ACATCTAATT TTTGGCTGCC GGAAAAAGTC CCGCTGTCGA ATGATATTCC GTCGTGGGCG ACACTCACGC CACATGAACA ACAACTGACT ATCCGGGTTT TTACCGGCCT CACGCTATTG GATACGATCC AGAATACACT GGGCGCACCT GCATTAATTA AAGATGCGAT TACCCCCCAT GAGGAAGCGA TATTTTCAAA TATCAGCTTT ATGGAGGCCG TACACGCACG TTCTTATAGC TCTATTTTTT CTACACTTTG TCTGACATCA GATGTAGACG ATGCCTACCG TTGGAGTGAG GATAATGGGC CACTCCAAAA GAAAGCTGAT ATTATTTCAC AGCATTACCA TAATGACGAT CCGCTGAAGA AAAAAATAGC CAGTGTATTT TTGGAATCAT TTTTATTCTA TTCCGGATTT TATTTACCCA TGTATTGGTC CAGTAGAGCT AAATTAACCA ACACCGCAGA TCTTATTCGG CTTATTATTC GGGACGAAGC TGTCCATGGA TATTATATCG GCTATAAGTT TCAAAAGGGG TTGGGAAAAA TAGATAGTGC CCATCGTCAG GAAATAAAGA ATTTCGCTTT CGACCTACTG CAAGATCTCT ATGATAATGA AGTGCGTTAT ACCGAAGATC TGTATGACCA CGTTGGCTGG ACAGAGGATG TAAAAAAATT TCTCCACTAC AATGCCAATA AAGCACTCAT GAATTTAGGC TATGAGGCAT TATTTCCCGC CAGCCAAGCG GCGGTCAGCC CTGCAATTCT GGCCGCGTTG TCGCCAAACG CAGATGAAAA CCACGATTTT TTCTCCGGAT CAGGTTCATC TTATGTGATC GGTAAAGCGG TCAATACTGA AGACGAAGAT TGGGATTTTT AA
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Protein sequence | MNVVKPITRI SAINWNKIED DKDLEVWNRL TSNFWLPEKV PLSNDIPSWA TLTPHEQQLT IRVFTGLTLL DTIQNTLGAP ALIKDAITPH EEAIFSNISF MEAVHARSYS SIFSTLCLTS DVDDAYRWSE DNGPLQKKAD IISQHYHNDD PLKKKIASVF LESFLFYSGF YLPMYWSSRA KLTNTADLIR LIIRDEAVHG YYIGYKFQKG LGKIDSAHRQ EIKNFAFDLL QDLYDNEVRY TEDLYDHVGW TEDVKKFLHY NANKALMNLG YEALFPASQA AVSPAILAAL SPNADENHDF FSGSGSSYVI GKAVNTEDED WDF
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