Gene YPK_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1108 
SymbolrnhA 
ID6090756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1247471 
End bp1247935 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content50% 
IMG OID641596175 
Productribonuclease H 
Protein accessionYP_001719859 
Protein GI170023354 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAC AGGTAGAAAT TTTCACCGAT GGCTCCTGCC TCGGTAATCC AGGCCCTGGG 
GGCTATGGCG CAATTTTACG TTACAAACAA CACGAAAAAA CGTTTAGTGC CGGCTATTAT
TTGACCACCA ACAACCGTAT GGAACTGATG GCAGCCATTG TGGCGCTTGA GGCATTGACC
TCGCCTTGCG AAGTGACCCT AAGTACTGAT AGCCAATATG TGCGTCAGGG TATCACTCAA
TGGATCCATA ACTGGAAAAA ACGCGGCTGG AAAACAGCCG ATCGCAAGCC AGTGCGCAAT
GTGGACCTGT GGCAGCGTCT GGATTTAGCT ATTCAGAGCC ATACCATACA GTGGGAGTGG
GTTAAGGGCC ATGCGGGTCA TCCAGAAAAC GAACGTTGCG ATGAACTGGC CCGGCAGGGA
GCTAATTCAC CGACACTCGA TGATACGGGC TATAACCCTG ATTAA
 
Protein sequence
MTKQVEIFTD GSCLGNPGPG GYGAILRYKQ HEKTFSAGYY LTTNNRMELM AAIVALEALT 
SPCEVTLSTD SQYVRQGITQ WIHNWKKRGW KTADRKPVRN VDLWQRLDLA IQSHTIQWEW
VKGHAGHPEN ERCDELARQG ANSPTLDDTG YNPD