Gene YPK_1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1094 
SymbolmetQ 
ID6087265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1232502 
End bp1233317 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content44% 
IMG OID641596160 
ProductDL-methionine transporter substrate-binding subunit 
Protein accessionYP_001719848 
Protein GI170023343 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen 
TIGRFAM ID[TIGR00363] lipoprotein, YaeC family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.174386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTAA AATTCAAATC TATCGCAGCA ATTAGTGCGC TGATTGGTAC CTTGGCTTTG 
GTGGGTTGTG GCCCGACTGA AAAAGCGCCA AACCATATTA AAGTTGGCGT TATTGTCGGT
GCAGAGCAAC AAGTTGCCGA AGTGGCTCAG AAAGTGGCTA AAGAAAAGTA CGGTCTGGAC
GTTGAACTGG TGACATTCAA TGACTATGTG TTACCAAACG AAGCACTGAG CAAAGGGGAT
ATCGACCTTA ACGCTTTCCA GCATAAACCT TATCTGGATC AGCAAATCAA AGACCGTGGC
TACAAACTGG TTTCTGTTGG CAACTCGTTC GTTTACCCCA TTGCCGGCTA TTCCAAGAAA
ATCAAGTCAC TGGATGAACT ACAACCTGGA TCTCAGGTCG CCCTACCAAA TGACCCTACT
AATTTGGGCC GTTCTCTGTT ATTGCTACAA AGCGTTGGTC TGATTAAGCT GAAAGACGGT
GTTGGCCTGC TGCCAACCGT ATTAGATGTG GTTGAGAACC CTAAAAATCT GAAACTGGTT
GAGTTGGAAG CGCCTCAATT ACCACGTTCT TTGGATGACC AACAAATCGC TCTGGCGATT
ATCAATACCA CTTACGCTAG CCAAATTGGC CTGACACCAG CTAAAGATGG TCTGTTTGTG
GAAAATAAAG AATCACCGTA TGTGAATCTG ATTGTTGCCC GCGAAGACAA TAAAGATGCG
GAAAATGTGA AAAAATTTGT TCAGGCTTAC CAGTCTGACG AAGTTTATGA TGCAGCGAAT
AAAGCATTCA ACGGTGGCGC AGTAAAAGGC TGGTAA
 
Protein sequence
MSLKFKSIAA ISALIGTLAL VGCGPTEKAP NHIKVGVIVG AEQQVAEVAQ KVAKEKYGLD 
VELVTFNDYV LPNEALSKGD IDLNAFQHKP YLDQQIKDRG YKLVSVGNSF VYPIAGYSKK
IKSLDELQPG SQVALPNDPT NLGRSLLLLQ SVGLIKLKDG VGLLPTVLDV VENPKNLKLV
ELEAPQLPRS LDDQQIALAI INTTYASQIG LTPAKDGLFV ENKESPYVNL IVAREDNKDA
ENVKKFVQAY QSDEVYDAAN KAFNGGAVKG W