Gene YPK_1077 details

Gene Information

• Locus tag: YPK_1077
• Symbol: fabZ
• ID: 6087618
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1216369
• End bp: 1216899
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 641596143
• Product: (3R)-hydroxymyristoyl-ACP dehydratase
• Protein accession: YP_001719831
• Protein GI: 170023326
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
• TIGRFAM ID: [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000000662978
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACTACTG ACACTCATAC TCTGCATATT GAAGAGATTT TGGATCTACT CCCGCACCGT 
TTTCCGTTCT TGCTGGTAGA CCGTGTCCTT GATTTTGAGG AAGGAAAATT TCTGCGTGCA 
GTGAAGAACG TCTCTTTTAA CGAGCCATTT TTCCAAGGCC ATTTCCCAGG CAAGCCCATC 
TTCCCTGGTG TGCTTATATT AGAAGCGATG GCGCAGGCTA CAGGGATTTT GGCGTTTAAG 
AGCCGCGGTA AACTGGAACC GGGCGAGCTT TATTACTTTG CTGGTATTGA TGAAGCACGT 
TTTAAGCGCC CAGTAGTGCC TGGCGATCAG ATGATCATGG AAGTTGAGTT TGTTAAAGAA 
CGCCGTGGCC TAACCCGTTT TACCGGTGTA GCTAAAGTCG ATGGCGAAAT CGTTTGCACT 
GCCACCATGA TGTGCGCGCG TAGCAAACCA GCAGCACCTG CAGAATCTGT CGTTGTAAAA 
CCAGATGTTG TAAAACCAGA TGTTGTAAAT CCTGTCGTTA AGGAGTCCTG A 

 

Protein sequence

MTTDTHTLHI EEILDLLPHR FPFLLVDRVL DFEEGKFLRA VKNVSFNEPF FQGHFPGKPI 
FPGVLILEAM AQATGILAFK SRGKLEPGEL YYFAGIDEAR FKRPVVPGDQ MIMEVEFVKE 
RRGLTRFTGV AKVDGEIVCT ATMMCARSKP AAPAESVVVK PDVVKPDVVN PVVKES