Gene YPK_1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1076 
SymbollpxD 
ID6087596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1215189 
End bp1216211 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content46% 
IMG OID641596142 
ProductUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
Protein accessionYP_001719830 
Protein GI170023325 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.02577e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCAA TTCGACTGGC TGATTTAGCC CAGCAGTTGG ATGCACAGGT GCACGGTGAT 
GGCGATCTTG TCATCACCGG CATCGCTTCT ATGCATTCTG CCCAACCTGA GCAAATCACG
TTTTTGTCAA ACAGCCGCTA TCGGGAACAA CTTGCATCTT GCAATGCAGG TGCTGTGGTA
TTGACTGAGG CTGATTTACC TTTTTGTAAA GTTGCTGCTT TAGTTGTTGA AAATCCTTAT
TTCACCTATG CGCGCATGGC TCAAATAATG GATACCACCC CTCAACCTGC TCAGGATATC
GCACCGAGTG CCGTGATTTC TCCGCAGGCA ACGTTGGGCG AGGGGGTTTC TGTTGGTGCG
AATGCAGTCA TAGAGTCGGG TGTTGTACTC GGCGATAATG TTGTCATCGG TGCGGGTTGC
TTCATTGGTA AGAACACCCA TATTGGTGCG GGTAGCCGTT TGTGGGCTAA TGTTTCTATC
TATCATGAAG TTGTTATTGG GCAGAATTGC CTGATCCAAT CTGGTACTGT CATTGGTGCC
GATGGCTTTG GTTATGCAAA TGATCGTGGT AACTGGGTAA AAATACCGCA GCTTGGTTCT
GTACATATTG GCGACCGTGT TGAGATTGGT GCCTGTACAA CGATTGACCG TGGTGCGCTG
GATAACACGA TTATTGGTAA CGGTGTCATC ATTGATAACC AATGTCAGAT TGCACATAAC
GTTGTGATTG GCGACAATAC GGCAGTTGCC GGTGGTGTTA TCATGGCTGG CAGTTTGAAA
GTGGGCCGCT ATTGTATGAT TGGCGGTGCC AGTGTGATTA ATGGCCATAT GGAAATTTGT
GACAAAGTAA CAATTACCGG GATGGGAATG GTGATGAGAC CAATCACTGA ACCTGGGTTA
TACTCCTCCG GTATTCCGTT ACAACCAAAT AAAATGTGGC GCAAAACTGC CGCTCTAGTG
ATGAATATTG ATGGTATTAA TAAACGCTTA AAAGCTGTTG AGCGTAAAAT CGATAAAGAA
TAA
 
Protein sequence
MPSIRLADLA QQLDAQVHGD GDLVITGIAS MHSAQPEQIT FLSNSRYREQ LASCNAGAVV 
LTEADLPFCK VAALVVENPY FTYARMAQIM DTTPQPAQDI APSAVISPQA TLGEGVSVGA
NAVIESGVVL GDNVVIGAGC FIGKNTHIGA GSRLWANVSI YHEVVIGQNC LIQSGTVIGA
DGFGYANDRG NWVKIPQLGS VHIGDRVEIG ACTTIDRGAL DNTIIGNGVI IDNQCQIAHN
VVIGDNTAVA GGVIMAGSLK VGRYCMIGGA SVINGHMEIC DKVTITGMGM VMRPITEPGL
YSSGIPLQPN KMWRKTAALV MNIDGINKRL KAVERKIDKE