| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1074 |
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| Symbol | |
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| ID | 6087945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1212143 |
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| End bp | 1214530 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641596140 |
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| Product | outer membrane protein assembly factor YaeT |
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| Protein accession | YP_001719828 |
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| Protein GI | 170023323 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000979052 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATGA AAAAGTTGCT CATAGCGTCG CTGCTGTTTG GCAGCGCCAC CGTATACGGT
GCAGACGGGT TCGTAGTGAA CGATATTCAT TTCGAAGGAC TGCAACGGGT CGCCGTCGGT
GCGGCGTTAC TTAATATGCC GGTTCGCGTA GGCGATACCG TCAGTGATGA TGACATCGGT
AAAACTATCC GTGCGTTGTT TGCTACAGGC AACTTCGAGG ACGTTCGCGT CCTGCGCGAT
GGTAATACGC TGATTGTTCA AGTCAAAGAA CGCCCCACGA TTGCCAGCAT CACTTTCTCC
GGTAATAAAG CGGTGAAAGA AGATATGCTC AAGCAGAATC TGGAAGCCTC TGGCGTCCGG
GTTGGCGAGG CCTTGGACCG AACCACTATA TCCAACATTG AAAAAGGACT CGAAGATTTC
TATTACAGTG TGGGTAAATA CAGCGCTTCA GTGAAGGCTG TTGTTACGCC ATTACCACGT
AATCGTGTTG ACCTGAAATT GGTCTTTACC GAAGGTGTTT CTGCAAAAAT TCAGCAGATT
AATATCGTAG GTAATCACAG TTTCACCACT GATGAGCTTA TCTCACGCTT CCAACTGCGT
GACGAGGTGC CTTGGTGGAA CGTAGTCGGT GATCGTAAAT ATCAGAAACA GAAACTGGCA
GGTGACCTTG AAACCTTGCG CAGCTTCTAT TTAGACCGCG GTTATGCGCG CTTTAATATC
GATTCAACTC AGGTGAGTTT GACGCCAGAT AAAAAAGGCA TCTATGTCAC CATCAATATT
ACTGAAGGCC CACAATTCAA GCTAAATAGT GTGATTGTGA GCGGCAATCT TGCAGGGCAT
CAATCTGAAG CTGAGAAGCT GACAAAAATT GAGCCGGGTG AGTTGTTTAA CGGCAGTAAA
GTGACACGTA TGGAAGATGA CATCAAAAAG ATGTTGGGCC GTTACGGCTA TGCTTACCCA
CGTGTTGTCA CTCAGCCAGA AATTAATGAT GACGATAAAA CAGTTAAACT GCATATCAAC
GTGGATGCAG GTAACCGTTT CTATGTCCGC CATATTCGTT TCGAAGGTAA CGATACCAGT
AAAGACTCGG TGTTGCGCCG TGAAATGCGC CAGATGGAAG GTGCATGGTT GGGCAATGAT
CAGGTAGAAG CGGGTAAAGA GCGACTTAAC CGTTTGGGTT ACTTCGAGAC CGTTGATGTT
GAGACTCAAC GTGTACCGGG AGCTGCCGAT CTGGTTGATG TGACCTATAA AGTGAAAGAA
CGAAATACGG GCAGCCTGAA CTTTGGTATT GGTTATGGTA CCGAGAGCGG GGTGAGTTTC
CAGGTTGGCG TTCAGCAAGA TAACTGGCTA GGCACCGGTA ATACCGTGGG TATTAACGGC
ACAAAGAACG ATTATCAGAC GTATGCAGAA TTTACGCTAA TGGACCCTTA CTTCACTGTT
GATGGTGTAA GTCTGGGTGG GCGTATTTTC TACAATGACT TTAAAGCGGA TAATGCAGAT
TTATCTGGCT ATACCAACAG TAGCTATGGT GCCGACGGTA CTCTTGGCTT CCCAATTAAT
GAGAATAACT CATTACGTGT TGGTGTCGGT TATGTCCATA ACGATCTGTC TGACATGTTA
CCGCAAGTTG CGATGTGGCG TTATCTTGAA TCAGTGGGTG AGCGCCCGGG CTATGATGGA
CGTGAAGGTT TCACTACTGA TGACTTCACT CTGAATCTAG GGTGGACATA TAACAACCTT
GACCGTGGTT TCTTCCCAAC ATCGGGGGTG AAATCATCGG TGAACACGAA AATTACCGTG
CCAGGCTCAG ATAATGAGTT CTACAAAGTG ACTTTCGATA CATCAGCTTA CCAGCCATTA
AATGAAGATC GTTCGTGGGT GCTCTTAGGC CGTGGTCGCT TAGGTTATGG TGACGGTATT
GGTTCGAAAG AGATGCCATT CTACGAAAAC TTCTATGCAG GTGGTTCCAG CACGGTTCGT
GGTTTCCGGT CGAATAACAT TGGTCCAAAA GCGGCGTATT ACGCTAATGG TGGGGCTACA
GTGACTAACT CTACCGATGC GGTAGGGGGT AATGCGATGG CGGTGGCCAG TATCGAGTTG
ATCACACCGA CACCGTTTAT CAGCGAGAAA TACTCGAATT CAGTGCGTAC CTCCATCTTT
ATCGACTCAG GTACTGTGTG GGATACCAAT TGGGAAAACA CAGCTAAAAC GCGTGCTGCA
GGTATTCCTG ATTACGGTAA AGCGAGTAAT ATTCGTGTGT CTGCGGGTGT AGCATTGCAA
TGGATGTCTC CATTGGGTCC ATTGGTGTTC TCATATGCTA AACCAGTTAA AGATTACGAA
GGTGATAAGT CAGAGCAATT CCAGTTTAAC ATTGGTAAAA CTTGGTAA
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| Protein sequence | MAMKKLLIAS LLFGSATVYG ADGFVVNDIH FEGLQRVAVG AALLNMPVRV GDTVSDDDIG
KTIRALFATG NFEDVRVLRD GNTLIVQVKE RPTIASITFS GNKAVKEDML KQNLEASGVR
VGEALDRTTI SNIEKGLEDF YYSVGKYSAS VKAVVTPLPR NRVDLKLVFT EGVSAKIQQI
NIVGNHSFTT DELISRFQLR DEVPWWNVVG DRKYQKQKLA GDLETLRSFY LDRGYARFNI
DSTQVSLTPD KKGIYVTINI TEGPQFKLNS VIVSGNLAGH QSEAEKLTKI EPGELFNGSK
VTRMEDDIKK MLGRYGYAYP RVVTQPEIND DDKTVKLHIN VDAGNRFYVR HIRFEGNDTS
KDSVLRREMR QMEGAWLGND QVEAGKERLN RLGYFETVDV ETQRVPGAAD LVDVTYKVKE
RNTGSLNFGI GYGTESGVSF QVGVQQDNWL GTGNTVGING TKNDYQTYAE FTLMDPYFTV
DGVSLGGRIF YNDFKADNAD LSGYTNSSYG ADGTLGFPIN ENNSLRVGVG YVHNDLSDML
PQVAMWRYLE SVGERPGYDG REGFTTDDFT LNLGWTYNNL DRGFFPTSGV KSSVNTKITV
PGSDNEFYKV TFDTSAYQPL NEDRSWVLLG RGRLGYGDGI GSKEMPFYEN FYAGGSSTVR
GFRSNNIGPK AAYYANGGAT VTNSTDAVGG NAMAVASIEL ITPTPFISEK YSNSVRTSIF
IDSGTVWDTN WENTAKTRAA GIPDYGKASN IRVSAGVALQ WMSPLGPLVF SYAKPVKDYE
GDKSEQFQFN IGKTW
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