Gene YPK_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1053 
Symbol 
ID6090497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1190471 
End bp1190866 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content48% 
IMG OID641596119 
Producthypothetical protein 
Protein accessionYP_001719807 
Protein GI170023302 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGTC GTTTAATGCT GATATTTTCC GCTCTGAGCG GTTTTTTCTA TGTTGCTTTC 
GGTGCCTTCG GGGCTCATGT ATTAAGCACC TCTCTGGGGC TGAATGAAAT GGCCTGGATT
CGTACCGGGC TGGAGTATCA GGGGTTCCAT ACGTTGGTTA TTCTGATATT AGCTGTTGCG
ATGCAACGGC AGGTCAGTCT TTGGTTTTAC TGGAGTGGGG CCTTGTTAGC GCTCGGAACG
CTACTCTTTA GCGGCAGTTT ATACTGTCTG GCTCTATCAC ACCTGAGACT GTGGATATAT
ATCACGCCAG TAGGCGGAGT CTGTTTTCTG GCGGGATGGA TTTTGATGTT GATTGGCGCA
CTGCGTCTAA GAAAAAGGGC AGAACGCCAT GAATAA
 
Protein sequence
MNSRLMLIFS ALSGFFYVAF GAFGAHVLST SLGLNEMAWI RTGLEYQGFH TLVILILAVA 
MQRQVSLWFY WSGALLALGT LLFSGSLYCL ALSHLRLWIY ITPVGGVCFL AGWILMLIGA
LRLRKRAERH E