Gene YPK_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1021 
Symbol 
ID6090511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1145648 
End bp1146556 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content50% 
IMG OID641596084 
ProductLysR family transcriptional regulator 
Protein accessionYP_001719775 
Protein GI170023270 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGAA TCACTGCAGC AGAGGTTTTT GTCGCGATTG TGGATCGGGG GAGTATGATT 
GCCGCCGCAG AGTCACTGGA GATGTCCAGG GCAATGGCGA CACGCTATCT GGCTCAGATG
GAGCAATGGG CGGGGGCGCG CTTATTGCAT CGGACCACCC GTAAATTGAG CCTGACACAT
GCCGGTGAGG CGACGCTCGA GCGCTGTCGA CGTATGCTTG AGTTTGCTCA GGATATGGAT
CTGGCTGAGG GGCAGGAAAG TGAAGAGTTA CGCGGTTTGC TACGTATCAG TTGCTCGCAA
TCTCTTGGGC AGAGTGCTCT GGCTATTGCA GTTGCTGACT ATCTACGCCG CTATCCACAG
GTCGCTGTTG ATTTACAGAT GAATAACCGG GCGATCAATT TAGTGGAAGA ACGTATTGAT
CTGGCGCTAC GGATTACCAA TGAATTAGAC CCCAACTTAA TTGCTCGCCC TCTTTCAACG
TGTTATTCAG TCGTCTGTGC CTCACCCGCT TATTTATCTG TCAGCGGTAT TCCCGAAAGC
CCACAAGATT TAACGGTACA CAACTGCCTG ACGTACTCCT ACTTCGGTGA GAGTTTATGG
CATTTTGATC AGTCGGGCGT GAAATCATCG GTTGCCGTCA GTGGCAATTT GAGTGCGAAT
GAATCGGTAG TTTTACTGAG TGGCGCTTTA GAAGGCGCGG GTATCACCTT GCAGCCGATC
TATTCTGTAG CGCCATATAT TGCCCGTGGT GAGTTAATTA AGTTATTACC AGATTATCAA
CCGCAGGCCA TGGGTATTTA TGGGGTTTAT GCTTCGCGCC GACAAATGCC AACCACATTA
AGAACGATGC TCGACTTTCT GGTTGAGTGG TTTGCCACAT ATCCTCAGTG GTTATCGACA
ATGAAGTGA
 
Protein sequence
MDRITAAEVF VAIVDRGSMI AAAESLEMSR AMATRYLAQM EQWAGARLLH RTTRKLSLTH 
AGEATLERCR RMLEFAQDMD LAEGQESEEL RGLLRISCSQ SLGQSALAIA VADYLRRYPQ
VAVDLQMNNR AINLVEERID LALRITNELD PNLIARPLST CYSVVCASPA YLSVSGIPES
PQDLTVHNCL TYSYFGESLW HFDQSGVKSS VAVSGNLSAN ESVVLLSGAL EGAGITLQPI
YSVAPYIARG ELIKLLPDYQ PQAMGIYGVY ASRRQMPTTL RTMLDFLVEW FATYPQWLST
MK