Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1021 |
Symbol | |
ID | 6090511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1145648 |
End bp | 1146556 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641596084 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001719775 |
Protein GI | 170023270 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGAA TCACTGCAGC AGAGGTTTTT GTCGCGATTG TGGATCGGGG GAGTATGATT GCCGCCGCAG AGTCACTGGA GATGTCCAGG GCAATGGCGA CACGCTATCT GGCTCAGATG GAGCAATGGG CGGGGGCGCG CTTATTGCAT CGGACCACCC GTAAATTGAG CCTGACACAT GCCGGTGAGG CGACGCTCGA GCGCTGTCGA CGTATGCTTG AGTTTGCTCA GGATATGGAT CTGGCTGAGG GGCAGGAAAG TGAAGAGTTA CGCGGTTTGC TACGTATCAG TTGCTCGCAA TCTCTTGGGC AGAGTGCTCT GGCTATTGCA GTTGCTGACT ATCTACGCCG CTATCCACAG GTCGCTGTTG ATTTACAGAT GAATAACCGG GCGATCAATT TAGTGGAAGA ACGTATTGAT CTGGCGCTAC GGATTACCAA TGAATTAGAC CCCAACTTAA TTGCTCGCCC TCTTTCAACG TGTTATTCAG TCGTCTGTGC CTCACCCGCT TATTTATCTG TCAGCGGTAT TCCCGAAAGC CCACAAGATT TAACGGTACA CAACTGCCTG ACGTACTCCT ACTTCGGTGA GAGTTTATGG CATTTTGATC AGTCGGGCGT GAAATCATCG GTTGCCGTCA GTGGCAATTT GAGTGCGAAT GAATCGGTAG TTTTACTGAG TGGCGCTTTA GAAGGCGCGG GTATCACCTT GCAGCCGATC TATTCTGTAG CGCCATATAT TGCCCGTGGT GAGTTAATTA AGTTATTACC AGATTATCAA CCGCAGGCCA TGGGTATTTA TGGGGTTTAT GCTTCGCGCC GACAAATGCC AACCACATTA AGAACGATGC TCGACTTTCT GGTTGAGTGG TTTGCCACAT ATCCTCAGTG GTTATCGACA ATGAAGTGA
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Protein sequence | MDRITAAEVF VAIVDRGSMI AAAESLEMSR AMATRYLAQM EQWAGARLLH RTTRKLSLTH AGEATLERCR RMLEFAQDMD LAEGQESEEL RGLLRISCSQ SLGQSALAIA VADYLRRYPQ VAVDLQMNNR AINLVEERID LALRITNELD PNLIARPLST CYSVVCASPA YLSVSGIPES PQDLTVHNCL TYSYFGESLW HFDQSGVKSS VAVSGNLSAN ESVVLLSGAL EGAGITLQPI YSVAPYIARG ELIKLLPDYQ PQAMGIYGVY ASRRQMPTTL RTMLDFLVEW FATYPQWLST MK
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