Gene YPK_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1011 
Symbol 
ID6090794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1136869 
End bp1137825 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content30% 
IMG OID641596074 
Productgeneral secretion pathway protein K 
Protein accessionYP_001719765 
Protein GI170023260 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCAAA ATGGCATTGC ATTACTAATG GTTTTATGTG CACTATTTTT GATGAGTACA 
ATGGTAATGA CATCATATCA CTATTGGTTC GATATCTATT ATCTGGCAAA AAATAGTCAG
CAACGGCAGA AAGAAAAATG GATATTACTC GGTGCCGAAG AGAAATTTGT GAGTGAATTA
ATAAAAAATA TTTCAGATGA TAGATTCAAT AATAATAATT TTAGACGTTT AATATCAGGG
AGAAGGGTTA CATCGGGTAC ATGGAACGTT AACCTTAAAT CAATCGATAA TACAAACTGT
TTTAACATTA ATGCATTAAA AACTAAAATT TCCAATCCCG AAGAAATCAT TGAAACTTAT
TCATGGCAGG TTTTTAAACA CTTGTTGTTA ATTAGCGGTG TAGGAGTGCA AGAAACACAG
GATACCCTGG ACAGAGTGGT TGAGTTATAT CGTTCAAACC TCATTATTGA ACAGGGTAAT
AATGGGTTGT CAACATTAAA ATATATTTCA TATGAGGTAG ATGAAATTAA TATTTCATCT
AAAATGAATC GTGCTGATTT TTTAAAAATA GCACCAATGC TTTGTATCCG ACGTGATAAA
AAATTATTAG TTAACATCAA TATGCTAGAT GTGGGAAATA ATCAGTATCT GCAAGCTGCT
TTGCTTAATA CAGTCAGTGA AAGGGATATT TATGATGTTA TTTCAGCAAA ACCTAATAAT
GGGTGGGATA ACGTTTTTAT ATTCTATAAT TTATTGTCAT CGCATTCAAC CATGAGCGGT
AGAAATGTAA ATAAAAATAT TTTAGATAAA TTAACCGTAG ATGAATATTT TATTAATTAT
ATATTTAGAA TCGATCATGA AGATAGTTAT TATCAACTGA TTACTTTTAT TCATGCTGTC
GGTAAGTCAA TAACTATTTT ACACAGGAGA TATAGTTTTA GTGAGCAACA TCATTGA
 
Protein sequence
MNQNGIALLM VLCALFLMST MVMTSYHYWF DIYYLAKNSQ QRQKEKWILL GAEEKFVSEL 
IKNISDDRFN NNNFRRLISG RRVTSGTWNV NLKSIDNTNC FNINALKTKI SNPEEIIETY
SWQVFKHLLL ISGVGVQETQ DTLDRVVELY RSNLIIEQGN NGLSTLKYIS YEVDEINISS
KMNRADFLKI APMLCIRRDK KLLVNINMLD VGNNQYLQAA LLNTVSERDI YDVISAKPNN
GWDNVFIFYN LLSSHSTMSG RNVNKNILDK LTVDEYFINY IFRIDHEDSY YQLITFIHAV
GKSITILHRR YSFSEQHH