Gene YPK_0992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0992 
Symbol 
ID6088672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp1113505 
End bp1114002 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content51% 
IMG OID641596055 
ProductPTS system mannose/fructose/sorbose family IIB subunit 
Protein accessionYP_001719746 
Protein GI170023241 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.529927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGGC CAAATATCGT CTGGACTCGT ATTGATGAGC GTTTACTTCA TGGACAGATC 
CGCATTACCT GGGGAAAGCA CACCGAAGCC AATTTAATTC TGGTGGCCAA TGATGACGCT 
GCCGATGGCC CAAACTCGGC TTTCATGCAG GCGGGAATGA AAGCCTCCGC TGGCGGTGAA 
TATGCAGTGC GCTTTTTCAG TATCCAGAAA ACAATTGATG TCATCCATAA AGCCTCTCCT 
CAGCAGAAGG TTTTCATTCT GTGTAACTCC CCGACGGATG TTGCGCGTTT GGTCGAAGGC 
GGTGTGCCAA TTACTCAGTG CAACGTGGGC AATATGCACT ACCACGACGG TAAACGTCAG 
ATTGCCAAAA CAGTCTCTGT GGATGAAAAA GATCTGGACG CTTTCCAACG TATGGCCGCG 
CTTGGCGTGG CCTGTACGGT GCAGAACACA CCAGACCAAA CGCCAATCAA TGTGATTGAG 
CTGGCCGCCA GGGCATAA
 
Protein sequence
MTRPNIVWTR IDERLLHGQI RITWGKHTEA NLILVANDDA ADGPNSAFMQ AGMKASAGGE 
YAVRFFSIQK TIDVIHKASP QQKVFILCNS PTDVARLVEG GVPITQCNVG NMHYHDGKRQ 
IAKTVSVDEK DLDAFQRMAA LGVACTVQNT PDQTPINVIE LAARA