Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0952 |
Symbol | |
ID | 6091262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1067938 |
End bp | 1069470 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641596015 |
Product | S-type pyocin domain-containing protein |
Protein accession | YP_001719706 |
Protein GI | 170023201 |
COG category | [R] General function prediction only |
COG ID | [COG5529] Pyocin large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG GTTATTATCT GGTTGTGGGC GATGAAACAA CTTGCGGGGG AGTTATCACC GAAGGGGAAC CGACCCACAC AATAATGGGA AGAGCCGTCG CCCGTGAACA AGACCGTATT ACCTGCGGTA AGCATCCGGG AACCTACATC ATTGTCGGGC ACATTCCCGG AGACACAATA CTGGGACGCA AGTTTGCGGG TTCACTACAC AGCACAAGTA ACTGTCCGTG CAAGGCAAGA TTTATCCCTT CGATGATGAA TGATGCCTAT GAGTTAATCG GGTCACCTAC CTCCGGTCAG TCCAGTATCG CACCCTCATT CACGGAGACC TCCGAATCAC CACCAGACGT AACCCCCGTT TTTGCCAAGT CTTGTCTGCG GGAAAAGGGG TGTACCGATG CGGGTACCGA GGGTGAACCA CACCGCAATT TCGGCAAAAT GGGCTTTTAT CAGACTATTC CCCCCTCACC AACCTCCCCA ACTGATAATA ATGAAGTGGA TCAACGCGCT CAAACTGCCA GGCGTAAACC TGTGGAAACA GAGCCTGATG TTAAGACACC GTGGTACAAG CGGGTGTTGG GGAGAACCAG TGCGGCTCCG GCCGCGGTAG TTGTACCGGT ATCGACTGGG GCGGGTCTGG CGGCCTTAGA GCAAGCGGGT ATTCAGGGAA TGCGGTTTGT CGGTGGTAAC CTGATGACGG CGGGACGCTG GATGGTGGGT TCATCACCTG TCGGTGCTGC TATCATGGGA ATGATGCCGG GCACCCTGAA TGAAGGTGAA ACCGATTTAC TCGACAAACT CAAGCTGGAA AACATTGCTA AGAATGGTGG CTCAGCACCA ACACGCGTGC GTTTTCGCTG GGTTGATAGC GGAAATGGCC GGTTAAAAGC CGAGGGCTAT CATATGAGTG CTGAAGGTGG ATTGGACAGA GTGCCAGTAC GCAAGATGAC GCTCAATGTC TTTACCGGCA ATTATGAGTT TTGGGAAGAT GGCGCGGCAG GGCCAACCAT TCTGTGGACA CCGAATGATC CCGGATTTAA AGCCCCATCG AATACCGGTA ATAACGACGG GCCGATCATT CGCACTACGA TTACGGTATT ACCGATGCCG GAAGCTGACG AAACCGGCGA GCATTCAACT ACATTACCCA TGCCAGAGGA GAAGGATTTC CGCGATTATA TTCTGATCCA TCCGTTGCTT GATTTGCCAC CGTTGTATAT CTATCTCAGT AAAAATCCAG ATGATCCTAT CTGGACTGAA AGAAAGAAAA TAACTCCGGT TCAAAATGCA TATGGACATT GGAAAAAACA TGGTTCTGAA TTTCCAGAAC TAACTAATTC GAAAGAGTAT GTCGATGCGA CTCACGATTT TGTTAACAAC CCTCCGGATG GGGCGCTAAA CAAAACTAGA AACAATGGAG ACGAGCTTTT TTATCATCCA GAAAGTAATA CATTGGGGAT TAAAGCAAAA AATGGTGCCC CAAGGACTAT GTTTAAACCA ACCGATAAAA TGGACTATTG GAACGATCAA TGA
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Protein sequence | MAKGYYLVVG DETTCGGVIT EGEPTHTIMG RAVAREQDRI TCGKHPGTYI IVGHIPGDTI LGRKFAGSLH STSNCPCKAR FIPSMMNDAY ELIGSPTSGQ SSIAPSFTET SESPPDVTPV FAKSCLREKG CTDAGTEGEP HRNFGKMGFY QTIPPSPTSP TDNNEVDQRA QTARRKPVET EPDVKTPWYK RVLGRTSAAP AAVVVPVSTG AGLAALEQAG IQGMRFVGGN LMTAGRWMVG SSPVGAAIMG MMPGTLNEGE TDLLDKLKLE NIAKNGGSAP TRVRFRWVDS GNGRLKAEGY HMSAEGGLDR VPVRKMTLNV FTGNYEFWED GAAGPTILWT PNDPGFKAPS NTGNNDGPII RTTITVLPMP EADETGEHST TLPMPEEKDF RDYILIHPLL DLPPLYIYLS KNPDDPIWTE RKKITPVQNA YGHWKKHGSE FPELTNSKEY VDATHDFVNN PPDGALNKTR NNGDELFYHP ESNTLGIKAK NGAPRTMFKP TDKMDYWNDQ
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