Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0842 |
Symbol | |
ID | 6089869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 963067 |
End bp | 963630 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641595904 |
Product | hypothetical protein |
Protein accession | YP_001719596 |
Protein GI | 170023091 |
COG category | [S] Function unknown |
COG ID | [COG3091] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000365146 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGATGT CAGCTTGCAT CTGGCTATCC ACCGTTTTAT TCTTCCGCAT TATGAGCACA CTAAGAATCC CTATCGCACT CCAACAAGCG GTTATGCAGT GTCTGCGTCA CTATTTGCAA CTGGCTAACC AGCATCTTGG CACCGCGTAT CCAGAGCCAA AAATCAATTA CCATCAGCGT GGTACCAACG CGGGCAGTGC CTATCTGCAA TCATTCGAAA TTCGTCTTAA CCCAGTGTTA TTGCTGGAGA ATAAGCAGCC GTTTATTGAT GAAGTCGTAC CACATGAATT AGCACACTTG CTGGTTTACC GCCAATTCGG CCGCGTAGCC CCCCATGGCA AAGAATGGCG CTGGATGATG GAACAGGTCT TAAAAGTACC CGCCAGCCGC ACCCACCAAT TCGAAGTGGC GTCAGTGCGC AGTAAGACCT TCAATTATCA ATGCAAATGT CAGCAACATG CTTTAACCAT TCGCCGTCAC AATAAAGTGC TGCGAGGAGA GAGTGAATAT CGCTGCCGGC AGTGTGGGGA GAAACTCCAG TTCATCACAA TAAATCCTGA TTAA
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Protein sequence | MVMSACIWLS TVLFFRIMST LRIPIALQQA VMQCLRHYLQ LANQHLGTAY PEPKINYHQR GTNAGSAYLQ SFEIRLNPVL LLENKQPFID EVVPHELAHL LVYRQFGRVA PHGKEWRWMM EQVLKVPASR THQFEVASVR SKTFNYQCKC QQHALTIRRH NKVLRGESEY RCRQCGEKLQ FITINPD
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