Gene YPK_0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0827 
Symbol 
ID6089588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp952220 
End bp952813 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content53% 
IMG OID641595889 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_001719581 
Protein GI170023076 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA TAGTATTAGC CACCGGCAAC CCCGGCAAAG TACGTGAACT GGCAAACCTG 
CTGGCCGACT TTGGTTTGGA TGTCGTCGCA CAAACCGAAC TGGGCGTTGA GTCTGCAGAA
GAGACGGGCT TAACCTTTAT TGAAAACGCC ATTTTAAAAG CCCGCCATGC AGCGCAAACC
ACCGGTTTAC CGGCCATCGC CGATGATTCA GGCTTAGCAG TAGACGCGTT AGGCGGCGCT
CCGGGGATTT ATTCCGCACG CTATGCCGGT ACTGATGCCA GTGACCAAGA GAATCTGGAA
AAGCTGTTGG CCGCATTGCA AAATGTCCCC GATGAAAAAC GCGGTGCTCA GTTCCATTGC
GTATTGGTCT ATATGCGTCA TGCTGAAGAT CCAACACCGC TGGTGTTCCA TGGCCAATGG
CCAGGGGTAA TTGCTCACCA ACCTGCTGGG GCTGCTGGGT TTGGCTATGA CCCTATTTTC
TATGTACCCG CGCTGGGTAA AACCGCAGCG GAACTGACAC GTGAAGAAAA GCACGCGGTA
TCCCATCGTG GTCAGGCCCT GAAATTGATG CTGGATGCGC TGCGCGATGC TTAA
 
Protein sequence
MQKIVLATGN PGKVRELANL LADFGLDVVA QTELGVESAE ETGLTFIENA ILKARHAAQT 
TGLPAIADDS GLAVDALGGA PGIYSARYAG TDASDQENLE KLLAALQNVP DEKRGAQFHC
VLVYMRHAED PTPLVFHGQW PGVIAHQPAG AAGFGYDPIF YVPALGKTAA ELTREEKHAV
SHRGQALKLM LDALRDA