Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0820 |
Symbol | |
ID | 6090308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 936615 |
End bp | 937874 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641595882 |
Product | adenine DNA glycosylase |
Protein accession | YP_001719574 |
Protein GI | 170023069 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1194] A/G-specific DNA glycosylase |
TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.746728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCGAG TAACGAGCGC CGCTAACGCC GCTGCGGCGT CAAGGACGAA GAGTATAAGG AAAGTTCCGG TTTACAGCAC AAGAACTCTA TGCTGCAATC CAGCTCTCAT TTATTTACCT GTCGGATATC GATACCTGCT TATGATGCAA GCGCAACAAT TCGCGCACGT GGTACTTGAT TGGTACCAAC ACTTTGGCCG CAAAACCCTG CCATGGCAGT TGGATAAGAC CCCCTATCAA GTATGGCTGT CAGAAGTGAT GTTGCAACAA ACTCAGGTTG CGACCGTCAT CCCCTATTTT CAACGTTTTA TGCTGCGCTT CCCTGATATT CAGGCACTGG CGGCTGCGCC GTTGGATGAA GTACTGCATT TATGGACCGG TTTGGGTTAC TACGCCCGTG CCAGAAACCT GCATAAAGCG GCCCAAATGG TCGTGGAACA CCATCAAGGG GAGTTTCCCA CAACATTTGA CCAGATACTG GCATTGCCGG GTATCGGGCG CTCAACTGCC GGGGCTATTT TATCGCTGTC TTTAGGCCAG CATTTTCCTA TTTTGGATGG CAACGTCAAA CGGGTGCTGG CCCGTTGCTA TGCCGTTGAC GGCTGGCCGG GAAAAAAAGA GGTCGAAAGC CGTCTGTGGC AAATCAGCGA AGATGTCACG CCCGCCAACC GGGTGGGCCA GTTTAATCAG GCAATGATGG ATTTAGGCGC GATGGTGTGT ACTCGCTCTA AACCTAAATG TGAACTTTGC CCATTGAATA TCGGCTGTAT GGCGTACGCT AACCACAGTT GGGCGCGCTA TCCGGGCAAA AAACCTAAAC AGACGTTGCC GGAAAAAACC GCCTGGTTCT TATTAATGCA AAATGGATCG CAAGTGTGGC TCGAACAGCG CCCCCCAGTC GGCTTATGGG GCGGCTTATT CTGTTTCCCA CAATTTGCTG AACAAGAAGA ACTCATTCAC TGGCTGCAAA AACAGGGTAT TCCCGCCAAT GAAACCCAGC AGTTAACCGC GTTTCGCCAT ACGTTTAGTC ATTTCCATCT GGATATAGTC CCTATATGGC TAAATACGGC CTCAGTCCGA GGATGCATGG ATGATGGCGC AGGTCTCTGG TATAACTTAG CCCAGCCACC TTCTGTAGGG TTAGCTGCTC CGGTTGAGCG TTTATTGCAT CAGTTATTAA AAGATCCGTT GGCAAAAGAT GAGTTAACGC AACAACAACT CACAAAGCAA TCGCCTACCC AACCAGCTTT ATTTGACTAG
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Protein sequence | MDRVTSAANA AAASRTKSIR KVPVYSTRTL CCNPALIYLP VGYRYLLMMQ AQQFAHVVLD WYQHFGRKTL PWQLDKTPYQ VWLSEVMLQQ TQVATVIPYF QRFMLRFPDI QALAAAPLDE VLHLWTGLGY YARARNLHKA AQMVVEHHQG EFPTTFDQIL ALPGIGRSTA GAILSLSLGQ HFPILDGNVK RVLARCYAVD GWPGKKEVES RLWQISEDVT PANRVGQFNQ AMMDLGAMVC TRSKPKCELC PLNIGCMAYA NHSWARYPGK KPKQTLPEKT AWFLLMQNGS QVWLEQRPPV GLWGGLFCFP QFAEQEELIH WLQKQGIPAN ETQQLTAFRH TFSHFHLDIV PIWLNTASVR GCMDDGAGLW YNLAQPPSVG LAAPVERLLH QLLKDPLAKD ELTQQQLTKQ SPTQPALFD
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