Gene YPK_0814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0814 
Symbol 
ID6090855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp930123 
End bp931106 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content47% 
IMG OID641595876 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001719568 
Protein GI170023063 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATCCA TAGTCAAAGA GGTTGATGAC GTCAGGCAGG TGTCATTGAT GAAGAGAACG 
GCGCTGTTCC TGCTAGACAA CTCAACGACC GTTGTTTTTA TTGTTATGTT GATTGCAGCA
GGTTTCTTCT CTGATCGATT TTACAGTGGG GATAATATTA CCAATGTGTT GCGCCAAAGT
GTTCCGCTCG GTCTGGCGGC ATTGGGGATG TTGTTCGTCA TTCTGACTGG TGGTATTGAT
CTGTCCATTG GCTCCATTAT GGCATTTGTC TCGGTCTTGG TAGGGCTGTT GATCCCAGAA
TTTGGGTTAT GGCCAGCGTT GATTGCGGGT GTCGGTATTG CCACTTTGAT GGGGGCATTC
TCCGGTTTTT TGGTCACTTG GTTTAATATC GCGCCTTTTA TTGCCACATT GGCGATGATG
ACCATTGCGC GAGGCGTGGC GCTGATTATT TCTAAGGGCC AACCGGTATT TATTGATAAC
GATGCTTTCG TAAACTTTGG TACGGGCTAT TTCCTTGGGA TCCCTCTGCC TGTCTATGTT
TTCCTCGGTT TTGCCATTAT TTGCCAATTG GTATACAAAA ATTCGGTCTT TGGTCGGTTG
GTGGTGTCGA TAGGCTCTAA CGAAACTGCG ACTCGCTTCG CAGGTATTCG GGTCAATAAC
TATAAGTTAG CCGTTTATGC TATTAGCGCA TTTGCCTGTG GTGCGGCGGG TATCATTTCT
GCCACCCGAA CGGGGGTGGG ATCACCGGTG CTGTCTATTG GATTTGAACT GGATGTCATT
GCGGCGGTAG TCGTTGGCGG GGCCAGTCTG GCGGGGGGCC ATGGCAATGT GGTCAATACT
ATTATTGGCG TATTTATCCT GAGTATAATA TCCAATCTAA TGAATTTAAT GAATATTTCC
GGCTATAACC AACAGGTGGT CAAAGGGGTT ATCATCATCA TCGCGGTGAT GGTCCAAAGC
CTAAAATCGC GGAGTAAAGC CTGA
 
Protein sequence
MGSIVKEVDD VRQVSLMKRT ALFLLDNSTT VVFIVMLIAA GFFSDRFYSG DNITNVLRQS 
VPLGLAALGM LFVILTGGID LSIGSIMAFV SVLVGLLIPE FGLWPALIAG VGIATLMGAF
SGFLVTWFNI APFIATLAMM TIARGVALII SKGQPVFIDN DAFVNFGTGY FLGIPLPVYV
FLGFAIICQL VYKNSVFGRL VVSIGSNETA TRFAGIRVNN YKLAVYAISA FACGAAGIIS
ATRTGVGSPV LSIGFELDVI AAVVVGGASL AGGHGNVVNT IIGVFILSII SNLMNLMNIS
GYNQQVVKGV IIIIAVMVQS LKSRSKA