| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0803 |
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| Symbol | |
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| ID | 6087098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 912664 |
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| End bp | 913155 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641595864 |
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| Product | Hcp1 family type VI secretion system effector |
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| Protein accession | YP_001719557 |
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| Protein GI | 170023052 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTC CAGTTTATCT GTGGCTGAAA GACGACGGCG GTGCGGACAT CAAGGGTTCT
GTTGATGTGC AAAGCCGTGA AGGCAGCATT GAGATCGTGG CACAGGACCA TAACCTGTAC
ATCCCAACCG ATAACAACAC CGGCAAGCTG ACCGGTACCC GTATCCACAC CCCGTTCGTA
TTCACCAAAG AAATCGATGC GTCGACCCCG TACCTGTACA AAGCGGTGAC CACCGGTCAG
ACACTGAAAA CCGCCGAGTT CAAATGGTAC CGCATTGATG ACGCTGGCCA GGAAGTTGAA
TATTTCAACA CCAAACTGGA AAACGTCAAA GTGGTTAAAG TTGCGCCGAA AATGCACGAC
GTGAAAGATC CGGCGAAAGA GAAGCACAAC CACCTGGAAC TGGTGGAACT GCGCTACGAA
AAAATCACCT GGACCTTTAA AGACGGCAAC ATCATTCATT CCGATTCTTG GAATGAGCGC
GCCACCGCAT AG
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| Protein sequence | MAIPVYLWLK DDGGADIKGS VDVQSREGSI EIVAQDHNLY IPTDNNTGKL TGTRIHTPFV
FTKEIDASTP YLYKAVTTGQ TLKTAEFKWY RIDDAGQEVE YFNTKLENVK VVKVAPKMHD
VKDPAKEKHN HLELVELRYE KITWTFKDGN IIHSDSWNER ATA
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