| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0764 |
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| Symbol | |
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| ID | 6089881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 864818 |
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| End bp | 867043 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641595825 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001719518 |
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| Protein GI | 170023013 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGCTG ACAGTAATAA AGCCAAAGTA AAAGAACGTA GTGCAGTTAA CTCGGCTTCA
ACGGGGACAG CCGCTATTTC TGCAGCAATT AACGCACCTT CCGGGCTACA ATTTACGCTG
ACCGCTGCCG GTTTACCGCC TCAGACATTT GCCGTCGTCG ATTTTTCATT AAACGAGGCG
TTCTCCTCAC CTTTTGTTTT ACATGTTGGC TTGGCCAGTG CCGATCCTGC GGTGGATTTT
TCTGCGGTAT TGGATGAAGA CGCGACGTTG TCTATCTGGC GCGAAGGTAT TTTACAGCGC
AGTATTACTG GCATGATTGC CAGCTTTGAA CAGGGCAATA CCGGGTTTCA CCAGACCCGC
TACAGTATGG TGATCCGCCC CGCGCTGTGG CGCACTTCTT TGCGCCGCAA CTCACGAATT
TTCCAGTTGG AATCGGTTGA GGCCATCATT TCTACGCTGT TGAAAGAGAA TGGCATTAAT
GATTTTGCCT TCGGTTTCCG TCATTCACAT CCAGCACGTG AGTTCTGTGT GCAATATCAA
GAGTCGGATT TTGATTTTAT CCAGCGCCTG ACAGCAGAAG AGGGCATTTT CTACTACTTC
GAATTCAGCA CGGGCAAAAA CACCGTGGTC TATGCCGATG ATGTTGGCTC CCTGCCGAAG
GGGGCGTCAC TGCCGTATAA CCCGAATGTG GCGGCACAGG CGCAGGAACT GAGCATCACC
ACCTTTACCC GCAGCGCGCA AGTACGCCCG GCGATGGTAC AGCTAAAAGA CTACACCTTC
AAAAATCCCA AATGGGCGGC TGAGTTCAGT GAACAAGCGC GCGAGTTACA GAATCAGAGG
CCGGATTACG AGCATTTTGA CTTCCCTGGG CGTTTCAAAG ATGAGCAACA TGGCAAGGAT
TTTACCCGTT ACCGGTTGGA GGCACTGCGC AACGATGCGA ATAAGGGGCA GGGGGAAAGT
AACGAATTTA CCTTGCAGCC GGGGCAACTC TTTAGCCTGA GTGCCCACCC GCGTGACGAT
TTAAATCATG CCTGGCAGAT CGTCAGCATT CAGCATACCG GTAAACAGAT GCAGGCACTG
GAGCAAGAGT CTGGCGATCA GGGCACCGTA TTGTTTAACC AGTTCAGCTT TATTCCACCG
ACGCAAACCT GGCGGCCAAC GCCGCTGCCA AAACCAGTCA CTGATGGCCC ACAGATCGCG
ATGGTCGTGG GGCCACCGAG CGAAGAAATT TACTGCGACG AGTATGGCCG CATCCGGCTG
CAATTCCAGT GGGACCGCTA TGGTCAAAGT AACGATCAAA GTTCATGTTG GATCCGCGTT
ACCCAGCCGT GGGCTGGCCA AGGCTGGGGC ATGTTGGCGA TCCCGCGTAT CGGCCAGGAA
GTGGTGGTAG ATTTTCTGCA CGGTGACCCG GACCAACCGA TTGTCACCGG GCGCACTTAT
CATGCTAATA ACCTTCCCCC TTCAGCATTG CCTGGGGCGA AAACGCAGAT GGCGCTACAG
TCGAAAACCC ATAAAGGCGA AGGCTATAAC GAATTGCGTT TTGAGGATCA AGACGGCAAG
CAAGAGCTGT CGATGCGGGC ACAGAGGGAC ATGAATACCA CGGTGTTGAA TGACCGTTCG
ACCACGGTTT CAGGCAATCA CACCGAAACG GTGACCAAAG ATCAAGCGGT GACGGTTTCG
GGTAATCAGA CCATGGATAT CACCCAAGAC CAAACCATTA CCGTCACTGG GACACAACGC
ATTGATGTGA CTCAAGATCG CATCATTGAC GTGACAGCAG AACAACAAAC GACGGTAAAA
GCAGATGATC GGTTACTGAT ATCTGGAAAA CAGAAAACCA AGATAGATCT GGATCAGGAA
TATGAGGTAG TCGGCTCACA AAAAAAGACT ATTGGGGCTA ACCAAACACT GAAGGTGGGC
GGATATCAAA AGAATACCCT CGAGGGTTAT AAAAAATCCA AGATTGGCGG CAATAATACC
ACCACCGTTG GGGGGCACGA TAAATTAACC GTCGGTGACA CAATCACGAT CACCGCAGGC
ACCAGTATTA CGCTGCAATG TGGTGCCTCC AGTATTGTTA TGGATGAAGC CGGTAATATA
AAAATTACCG GGGTTAATAT CACCTCTGCG GCATCGACGA CACATACGAT AAAAGCTAAA
ACAGTGACAT CCTGCGGTGA TACGGAAAAT ATCGTGGAAG GTGGCATTCT AAAATTAAAT
CCTTAA
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| Protein sequence | MFADSNKAKV KERSAVNSAS TGTAAISAAI NAPSGLQFTL TAAGLPPQTF AVVDFSLNEA
FSSPFVLHVG LASADPAVDF SAVLDEDATL SIWREGILQR SITGMIASFE QGNTGFHQTR
YSMVIRPALW RTSLRRNSRI FQLESVEAII STLLKENGIN DFAFGFRHSH PAREFCVQYQ
ESDFDFIQRL TAEEGIFYYF EFSTGKNTVV YADDVGSLPK GASLPYNPNV AAQAQELSIT
TFTRSAQVRP AMVQLKDYTF KNPKWAAEFS EQARELQNQR PDYEHFDFPG RFKDEQHGKD
FTRYRLEALR NDANKGQGES NEFTLQPGQL FSLSAHPRDD LNHAWQIVSI QHTGKQMQAL
EQESGDQGTV LFNQFSFIPP TQTWRPTPLP KPVTDGPQIA MVVGPPSEEI YCDEYGRIRL
QFQWDRYGQS NDQSSCWIRV TQPWAGQGWG MLAIPRIGQE VVVDFLHGDP DQPIVTGRTY
HANNLPPSAL PGAKTQMALQ SKTHKGEGYN ELRFEDQDGK QELSMRAQRD MNTTVLNDRS
TTVSGNHTET VTKDQAVTVS GNQTMDITQD QTITVTGTQR IDVTQDRIID VTAEQQTTVK
ADDRLLISGK QKTKIDLDQE YEVVGSQKKT IGANQTLKVG GYQKNTLEGY KKSKIGGNNT
TTVGGHDKLT VGDTITITAG TSITLQCGAS SIVMDEAGNI KITGVNITSA ASTTHTIKAK
TVTSCGDTEN IVEGGILKLN P
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