| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0739 |
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| Symbol | |
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| ID | 6089781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 797813 |
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| End bp | 800713 |
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| Gene Length | 2901 bp |
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| Protein Length | 966 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641595800 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001719493 |
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| Protein GI | 170022988 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.828108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCATT TCTTTATTCG TCGCCCCAAG TTTGCCATTG TTATCGCATT GGTGATCACC
CTGGTTGGCT GGGTTTCACT GTATGTTATC CCGGTCGAGC AATACCCGGA TATCACGCCG
CCGGTGGTCT CCGTCAGTGC TGTTTATCCC GGTGCCAGCG CCAGAGACGT GGCGCAAGCC
GTCGCGTCAC CACTGGAAGC GCAGGTCAAT GGCGTCAGCC ATATGTTGTA CATGGAATCA
ACCAGCGCCA ATAACGGCAG CTACCAATTG AGCATTACCT TTGCCAGTGG CACCGATCCC
GATATGGCGG CGGTTGAGGT ACAAAACCGC ATTTCGCAGG TGAGCGCGCA ACTGCCTGCG
GAGGTGAATG AAAATGGCAT CTCGGTACGC AAACGTGCGT CAAACCTACT ATTAGGGGTC
AGCGTTTTCT CCCCGCAACA GACCCATGAC GCACTGTTTG TCAGTAACTA CACCAGCATA
CAATTGCGTG ATGCTATTGC ACGTATCAGT GGTGTCGGTG ATGTACAGGT CTTTGGTGCG
CGCGATTACA GTATGCGTGT CTGGCTGGAT CCACAGCGCA TGGAATCACT GAATGTCAGC
GTGCAGGATA TCGTTGCCGC GTTACAACAG CAGAACGTAC AAGCGGCGGC AGGGCAGATA
GGCTCTTCAC CGTCGATGCC CAATCAACAA CAGACACTGA CCATCAGTGG GCAGGGGCGC
TTGACCGATG CACGGCAGTT TGCCGATGTG ATTATCCGCA GTAATCCACA GGGCGGTATG
ATCCGCTTGG GCGATGTGGC CCGCGTGGCC TTGGGGGCAC AGAATTATCA GGTCAGTGCG
GCACAAAACC AGACTGAATC AGCCTTCTTA GTGGTGTATC CGGTTCCCGG AGCCAATGCA
CTTAATGTGG CCAATGGCGT CCGTGATGAA ATGGCCCGGC TGTCGGCCGC CTTTCCGGCG
GATCTCACCT ATGAAATTAA TTACGACTCC ACCCTGCCGG TGACGGCGAC ACTGCATGAG
ATTGCGGTGT CACTGACCTT GACACTGATT GTGGTGCTCG CCGTGGTGTA TCTGTTTTTA
CAAAGTCTGC GCGCGACCTT TATTGTGGCA CTCACGGTTC CGGTCTCGTT GCTTGGCACC
TTTGCTGTGC TGTATGTCTT TGGTTATTCA GCCAATACCC TTAGCCTGTT TGCCATTATT
CTGGCACTGA CCATTGTGGT GGATGATGCC ATTGTGGTGG TCGAAAACGT TGAGCGGTTA
TTGTCGAACG ACCCTCATCT TTCACCGGCA GAGGCTACCC GGCAGGCGAT GAGCCAGATT
GCCGGGCCGA TCATCGCCAC CACACTGGTG TTGATGGCGG TATTTGTGCC AATCGCTATC
TTGCCGGGGA TTATTGGCGA GTTGTATCGC CAGTTTGCGG TAACGCTTTC GGCGGCGGTC
ATTCTCTCCA GTATCAATGC GTTAACGCTG AGTCCGGCGC TGTGTGCCGT CCTGCTTAAG
CGGCGCACAC TCGCAACGAC GGGCATGTTC GGTACGATTA ACAAGGGGCT TGATCGCGCC
CGTGATGGTT ATGTTGGCTT AACGGGGCGG ATCAACCGCC GTGCGGTATT TAGTATCGCC
GCGCTGCTAC TGGTGGGGTT AGCAACATGG TGGGGTTATA GCCGACTGCC AACCTCGTTC
CTACCAGAGG AAGATCAGGG CTATTTCTTT GTCAGCTTAC AATTGCCAGA TGGTGCCTCA
CTGAACCGAA CCCAAACGGT GATGGACCAG ATGTATCAAC AGGTGAGCAC GAATGAGGCC
GTTGAGGATG TAATAAAAAT TACGGGGTTC AGCCTGCTCA GTGGCAACAA TGCGCCCAAT
GCCGGTTTTG CTATTGTGAT GCTAAAACCT TGGGGCCAGC GGCCGCATAT TGATCGGGTG
CTGGCCAGTA TTCAGGCCAA TCTGGCGGCT ATCCCCTCGG CAATGATTAT GGCGGTGAAC
CCGCCAGCGA TTGCTGGTTT GGGCAGTGCT TCGGGCTTTG ATTTGCGCAT TCAGGCACTG
CTAGGCCAAT CGCCGCAAGA GCTGGCGCAG GTGAGCCAAG GGATTATTTT TGCCGCCAAT
CAGGACCCGA CATTGAGCCG GGTCTTTACC ACCTTCAGTG CTTCGGTGCC TGAAACCAAT
TTGAGTATCG ATCGTGACCG CGCGGCCTTG TTACAAGTGC CGGTCAGCCG AATCTTCCAA
ACGCTGCAAA CCTCGCTGGG GGGGATGAAT GCCGGTGATT TCACCTTGAA TAACCGTATG
TTCCGGGTGC AATTACAAAA CGATATGAAT TTCCGCCAGC GCACGGCGCA GATCAATAAC
CTGAATGTAC GCAGTGATAA CGGGGCATTA GTCAGTTTAG CGAACCTGGT CACGTTGACC
CCGTCAGTGG GCGCGCCCTT TATCAGTAAT TTCAACCAGT TCCCTTCGGT TGCGATCAGC
GGTTCAGCGG CTGATGGGGC CAGCTCAGGT CAGGCGATGG CGGCAATGGA AGCGCTATTG
GCGCAGAATT TACCGCAAGG CTACAGCTAC AGTTGGAGCG GGATGTCATG GCAAGAGCAG
CAGACCGGTG GGCAAGTGGT GTTTATTTAT CTTGCGGCGC TGGTCTTCGC TTATCTGTTT
TTAGTCGCCC AGTATGAAAG CTGGAGTATC CCGCTGGTGG TGGTTCTCTC GGTGGTGTTT
GCCGTGGGGG GAGCGGTGGC GGGGCTATCG GCGATGGGGT TTGCCAACGA TGTGTATGCG
CAAATAGGCT TAGTGCTACT GATCGGGTTG GCGGCAAAGA ATGCGATTCT GATTGTCGAA
TTCTCCAAGG CGCGGCGAGA AGAGGGGGCG AGTATGCGGA GGCTGCACAG GACGGCGCTA
AACAGCGTTT CCGCGCCGTG A
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| Protein sequence | MLHFFIRRPK FAIVIALVIT LVGWVSLYVI PVEQYPDITP PVVSVSAVYP GASARDVAQA
VASPLEAQVN GVSHMLYMES TSANNGSYQL SITFASGTDP DMAAVEVQNR ISQVSAQLPA
EVNENGISVR KRASNLLLGV SVFSPQQTHD ALFVSNYTSI QLRDAIARIS GVGDVQVFGA
RDYSMRVWLD PQRMESLNVS VQDIVAALQQ QNVQAAAGQI GSSPSMPNQQ QTLTISGQGR
LTDARQFADV IIRSNPQGGM IRLGDVARVA LGAQNYQVSA AQNQTESAFL VVYPVPGANA
LNVANGVRDE MARLSAAFPA DLTYEINYDS TLPVTATLHE IAVSLTLTLI VVLAVVYLFL
QSLRATFIVA LTVPVSLLGT FAVLYVFGYS ANTLSLFAII LALTIVVDDA IVVVENVERL
LSNDPHLSPA EATRQAMSQI AGPIIATTLV LMAVFVPIAI LPGIIGELYR QFAVTLSAAV
ILSSINALTL SPALCAVLLK RRTLATTGMF GTINKGLDRA RDGYVGLTGR INRRAVFSIA
ALLLVGLATW WGYSRLPTSF LPEEDQGYFF VSLQLPDGAS LNRTQTVMDQ MYQQVSTNEA
VEDVIKITGF SLLSGNNAPN AGFAIVMLKP WGQRPHIDRV LASIQANLAA IPSAMIMAVN
PPAIAGLGSA SGFDLRIQAL LGQSPQELAQ VSQGIIFAAN QDPTLSRVFT TFSASVPETN
LSIDRDRAAL LQVPVSRIFQ TLQTSLGGMN AGDFTLNNRM FRVQLQNDMN FRQRTAQINN
LNVRSDNGAL VSLANLVTLT PSVGAPFISN FNQFPSVAIS GSAADGASSG QAMAAMEALL
AQNLPQGYSY SWSGMSWQEQ QTGGQVVFIY LAALVFAYLF LVAQYESWSI PLVVVLSVVF
AVGGAVAGLS AMGFANDVYA QIGLVLLIGL AAKNAILIVE FSKARREEGA SMRRLHRTAL
NSVSAP
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