| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0702 |
|---|
| Symbol | flhA |
|---|
| ID | 6088864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 764293 |
|---|
| End bp | 766386 |
|---|
| Gene Length | 2094 bp |
|---|
| Protein Length | 697 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641595763 |
|---|
| Product | flagellar biosynthesis protein FlhA |
|---|
| Protein accession | YP_001719456 |
|---|
| Protein GI | 170022951 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
|---|
| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.628209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATA AATTATATGA TATTTCTCGT CTGTTAAAAG AGACGCATAT TGCAGTCCCC
GTATTATTAC TGTGCGTCTT GGCAATGGTA ATATTGCCAT TATCACCTCT GGTTCTGGAT
ATTTTATTCA CCTTTAATAT TGTGATGGCT GTATTGGTGT TATTGGTCAG TGTGAACAGT
AAACGGCCAC TGGATTTTTC AATTTTACCG CCGATATTAC TGATCGCTAC GCTGATGCGT
TTAACCTTAA ACGTCGCCTC CACACGCGTG GTATTACTCA ATGGTCATGA AGGGGCTGAT
GCGGCAGGTA AAGTGATCGA AGCCTTTGGC CAGGTGGTTA TTGGCGGTAA TTTTGTTGTT
GGCTTTGTTG TCTTTATCAT CTTGATGATC ATCAATTTCG TGGTAGTGAC CAAAGGGGCG
GAACGTGTTT CTGAAGTCTC TGCTCGCTTT ACCTTGGATG CGCTCCCGGG CAAACAGATG
GCTATTGATG CGGATCTTAA CGCCGGATTA ATTAATCAGG AACAAGCCAG TATTCGCCGT
AAAGAAGTGG CCAGTGAGGC CGATTTCTAC GGCGCAATGG ATGGCGCATC AAAGTTTGTA
CGCGGGGATG CGGTCGCCGG GATGATGATC CTGGTGATTA ACGTGATTGG CGGTATTTGT
ATTGGTATTT TTAAATACGA TTTGAGCGCC AGCCAGTCAT TCCAGCAATA TGTTCTACTG
ACCATTGGTG ATGGTTTGGT GGCACAAATT CCGTCACTGT TATTGGCAAC TGCGGCGGCA
ATTATTGTCA CTCGAGTGAG TGATGGCGGC GATATGACTG ATGAAGTTAA AGATCAGTTA
TTGGCTAAAC CCACGATCTT GTATGCTGCG GCTTTTGTGA TGTTTATTCT CGCTATCGTG
CCGGGGATGC CCCATCTCGC CTTTCTCAGT TTTACCGGAT TACTGCTGTT CGCCGCTAGG
CAGCAAAGTA AAAAAATTCA GCAAGCAGAT CTTAACCCCG ATTTTACGGC CTTAAACCCG
GTTATTTCTG ACGAAAATAC CCTGAGTATC AGTTGGGACA GTATTCCTGC GGTCGAACCC
ATTGGTTTAA ATTTGGGTTA TAAACTGGTC ACGTTGGTGG ATGAATCAAA GGGTAAACCG
TTGAACCAAC GGCTACGCGG CGTGCGACAA ATCATCTCCG AAAGCAGCGG CGTTTTATTG
CCAGAAGTCC GGGTGCGGGA AAACTTCCGT TTAAAACCGT CCCAATACAC CATCAATATT
AATGGTGTCA GGATCGCGGG GGGAGAAGTC CATGTTGATA AGCTCATGGC TATTCCAACG
ACACAGCAAT ACGGTGAGGT TGATGGGATT TTAGCCACTG ACCCGACTTA TGGTTTGGCC
ATCGTGTGGA TAGACCCGCA AGAGAAACCG CAGGCCTTAA ATTTGGGTTA TCAAGTGGTA
GATTGCGCCA GCGTGGTAGC AACACATGTG AATAAGGTGG TTCGGGAGCA TTTATCTGAA
CTGTTTAACT ATGACGATAT CACCTTATTA CACCAACGGC TTGCCGCACT TTCCCCACGT
TTGGCCGAGG ATTTAGTCAC GACACTGAAT TTTAGTCAGT TATTGAAAGT GTATCGCCAA
CTCTTAACTG AAAATGTGTC ATTAAAAGAT ATTGTCACCA TTTCCACCAC CCTACTGGAT
AGCGTTACGG TGACCAAAGA TGCATTATTG CTGACCTCAG ATGTTCGCTA TGCATTACGT
AATGGGATAG TTAATAGCAT CAATGGCGAT GATAAGGATC TGGCGGTTTA TACCATCAAT
AATGAATTAG AGAATATGCT GTTAAGCTCT CTGAATCAGG CCCAACAAGC GGGGAAAGTG
GTATTAGATA ATTTCCCGGT CGATCCGAAT ATTCTGACGC AATTACAACA GAATCTGCCG
ATCATTAAAG AACAAATGAA AGCAGAAAAT CACCAGCCTA TTTTGCTGGT TACGCCACAA
CTGCGGCCAC TGATATCCCG CTATGCACGT CTGTTCTGTT CTGGGTTAAA TGTGCTGTCG
TATAACGAAA TCCCAGATGA TATGAATTTG AATGTGATTG GGGTGCTGGA GTAG
|
|---|
| Protein sequence | MKHKLYDISR LLKETHIAVP VLLLCVLAMV ILPLSPLVLD ILFTFNIVMA VLVLLVSVNS
KRPLDFSILP PILLIATLMR LTLNVASTRV VLLNGHEGAD AAGKVIEAFG QVVIGGNFVV
GFVVFIILMI INFVVVTKGA ERVSEVSARF TLDALPGKQM AIDADLNAGL INQEQASIRR
KEVASEADFY GAMDGASKFV RGDAVAGMMI LVINVIGGIC IGIFKYDLSA SQSFQQYVLL
TIGDGLVAQI PSLLLATAAA IIVTRVSDGG DMTDEVKDQL LAKPTILYAA AFVMFILAIV
PGMPHLAFLS FTGLLLFAAR QQSKKIQQAD LNPDFTALNP VISDENTLSI SWDSIPAVEP
IGLNLGYKLV TLVDESKGKP LNQRLRGVRQ IISESSGVLL PEVRVRENFR LKPSQYTINI
NGVRIAGGEV HVDKLMAIPT TQQYGEVDGI LATDPTYGLA IVWIDPQEKP QALNLGYQVV
DCASVVATHV NKVVREHLSE LFNYDDITLL HQRLAALSPR LAEDLVTTLN FSQLLKVYRQ
LLTENVSLKD IVTISTTLLD SVTVTKDALL LTSDVRYALR NGIVNSINGD DKDLAVYTIN
NELENMLLSS LNQAQQAGKV VLDNFPVDPN ILTQLQQNLP IIKEQMKAEN HQPILLVTPQ
LRPLISRYAR LFCSGLNVLS YNEIPDDMNL NVIGVLE
|
|---|
| |