Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0693 |
Symbol | |
ID | 6088959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 752537 |
End bp | 753952 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641595754 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001719447 |
Protein GI | 170022942 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3469] Chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAAA AAAATGCAAA AAAATCACCG GTCCAACGAG TCGATATTAA AGATAAAAAA ATATTTATGG GGTTCTGGCA CAATTGGACA TCCTATCCTA GAAATGGCTA TCAGTATGGC CAGTCTACAA ATATACCGTT GGCCGATATT CCTAAAGAGT TCAATGTTAT TGCCGTCGCC TTTATGAAGG GAAGCGGTAT CCCAACATTT AGACCGTATA ACGGGTCGGA TGAGCAGTTC CGCACACAAG TGGATAAACT GCATAGTGAG GGCCGCTCAG TACTGATCTC CTTAGGGGGC GCTGATGCAG AGATCTCATT AACATCCCAA GACGAGGCGG CCTTTGTCGC AGAGATTAAA CGATTAGTTG ATGTCTATGG TTTTGATGGT TTAGATATCG ATTTAGAGCA GGCGGCAATT AGTTATAAAG AAAACTCGAC GGTGATCCCT CGGGCATTAA AAACAGTAAA AGACTATTAC GCTAACTTAG GCCAACACTT TATTATTAGT ATGGCACCCG AATTCCCTCA CTTAAGAATT AATGAGGCAT ATGTTCCTTA TATTAAGGCG TTAGAGGGAT ATTATGACTT TATTGCACCA CAATATTATA ATCAGTTGGG TGATGGCGTC CACACGGATA GCGGAGAGTT TATCGCTCAA AGTGATAATG AGCGAAAAGA AGATTTTCTT TACTACTTAA CTAAAAATTT GGTTTCTAGT TCTCAAAAAT TTATTAATAT CCCAGCAGAT AAATTTGTTA TGGGGTTACC GGCAAATAAT GACGCGGCAA ATAATGGCTA TGTCATTGAT AAAAAAGATG TGCATAACGC CTTCGCCAGA CTGGATGCCG CAGGTTTATC CATTCGAGGC CTGATGACCT GGTCAATCGA CTGGGACAAC GGTAAAGATG TCCAAGGGAA AAGTTATAAT TGGGAGTTTA AAACACGCTA CGCCTCCCTG GGTAATAATG ATGATGGCAG CAGTAATAAT AATCTCCCAT TGGCCCCCTA CAACCTTATT CAAACTTCAA AAGCGGCGAA CAGCCTTGAA TTATCTTGGC AGCATACGCT TAATGTCAAT GCTATCAGCT ATTACTCCAT TTTCCGTGAT GGCAATAAAG TAGGGACCTC GACGAATACA ACCTTTACAG ATACCGGGCT AGAACCCAAT AAACAATATA TCTATAAAGT GAGCGCTACC GACTCACAAG GGCAAATTTC TGATTTCAGT ACGGTGGTAA CGGCAACGAC GTTAACGACC AACCTTTCAG TCTGGGAGAA AGGTCAATGG TACAACGATA ATGATTCGGT ACGACATAAC GCAGAAAACT ATATTTGCGT CATGCAACAC ACCTCAAACG CATTCTGGTC ACCAGATCAA GCCACCACAT TATGGCAGCT CGTCGTACAG CGCTAA
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Protein sequence | MSKKNAKKSP VQRVDIKDKK IFMGFWHNWT SYPRNGYQYG QSTNIPLADI PKEFNVIAVA FMKGSGIPTF RPYNGSDEQF RTQVDKLHSE GRSVLISLGG ADAEISLTSQ DEAAFVAEIK RLVDVYGFDG LDIDLEQAAI SYKENSTVIP RALKTVKDYY ANLGQHFIIS MAPEFPHLRI NEAYVPYIKA LEGYYDFIAP QYYNQLGDGV HTDSGEFIAQ SDNERKEDFL YYLTKNLVSS SQKFINIPAD KFVMGLPANN DAANNGYVID KKDVHNAFAR LDAAGLSIRG LMTWSIDWDN GKDVQGKSYN WEFKTRYASL GNNDDGSSNN NLPLAPYNLI QTSKAANSLE LSWQHTLNVN AISYYSIFRD GNKVGTSTNT TFTDTGLEPN KQYIYKVSAT DSQGQISDFS TVVTATTLTT NLSVWEKGQW YNDNDSVRHN AENYICVMQH TSNAFWSPDQ ATTLWQLVVQ R
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