Gene YPK_0673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0673 
Symbol 
ID6089736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp737503 
End bp737934 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content48% 
IMG OID641595736 
Productbiopolymer transport protein ExbD 
Protein accessionYP_001719429 
Protein GI170022924 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02803] TonB system transport protein ExbD, group 1 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.717059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATGC GAATGAATGA TTCCCTCGAC GAGAGTGGAG AATTACACGA AATTAACGTG 
ACGCCGTTTA TTGATGTCAT GTTGGTGCTG CTGATTATCT TTATGGTCGC CGCGCCGTTG 
GCAACGGTAG ATATCAAAGT GGATCTACCT GCATCTTCGG CAGTACCGCA GCCGCGGCCA 
GAGAAACCGG TATTCTTGAC GGTTAAAGCG GATAACCAGC TTTATGTCGG TGACCAGCCA 
GTTGACCGTG AAACATTAGC CACGGCACTG GACAAAGTGA CCCAATCCAA TAAAGAAACC 
ACGATTTTCT TCCAGGCAGA TAAAGTGGTG GATTATGAAA CCTTGATGAG CGTGATGGAT 
GCGCTACGTA AATCAGGCTA TCTCAAAGTT GGGTTAGTGG GTATGGAAGC AGGGTCCAGC 
GGCGTACAAT AA
 
Protein sequence
MAMRMNDSLD ESGELHEINV TPFIDVMLVL LIIFMVAAPL ATVDIKVDLP ASSAVPQPRP 
EKPVFLTVKA DNQLYVGDQP VDRETLATAL DKVTQSNKET TIFFQADKVV DYETLMSVMD 
ALRKSGYLKV GLVGMEAGSS GVQ