Gene YPK_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0602 
Symbol 
ID6090285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp667709 
End bp668341 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content35% 
IMG OID641595664 
ProductYheO domain-containing protein 
Protein accessionYP_001719358 
Protein GI170022853 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.156271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGG ATGAAATTAT TAAGTCATGG ATACCAATGG TAGAGTTTAT CGCTCGCACC 
TACGGTGAAA ATTGTGAGGT GATATTGCAC GATTTACGAG ATCTAGATAA ATCCATTGTG 
GCCATAAAAA ATAATCATAT AACTGGTCGC CAGATCGGTG GCACTATTAC AGATTTTGCT 
TTGAAGCTTA TCCATGAAAA ATCTTGGGAA GAACGTGATT TTATCATTAA TTACAAAGGG 
AGAATTCCTG GGAAATCAGA AAATATCCGT GCTTCAACCT TTTTCATTAA AGATGAAGAG 
GGTGAAATTA TTGCGATGCT CTGTATGAAT GTTGATTTAA CTTCGTTATC TCTAGCGCAT 
AAAATTATCG GAAACTTAAT GTTTATTGAG GAAGATAATA AGAATGATGA GGAAGTACTC 
AGGAATACAT CCATAACGGA TATGTTACAT GAATTGATTA CAGATGTTTT AAAGAACTAC 
CCTCGTGCAC CTTCGTTATT GATTATGGAC GAGAAAAAAG AAATCGTTAA AAAACTTAAT 
GAAAAAGGCG TTTTTTTACT TAAAGGGGCA GTTGCTGAGG TGGCGATGCG TCTTGAAACG 
TCAGAGCAGA CAATTTATCG TTATTTAAAA TAG
 
Protein sequence
MTQDEIIKSW IPMVEFIART YGENCEVILH DLRDLDKSIV AIKNNHITGR QIGGTITDFA 
LKLIHEKSWE ERDFIINYKG RIPGKSENIR ASTFFIKDEE GEIIAMLCMN VDLTSLSLAH 
KIIGNLMFIE EDNKNDEEVL RNTSITDMLH ELITDVLKNY PRAPSLLIMD EKKEIVKKLN 
EKGVFLLKGA VAEVAMRLET SEQTIYRYLK