Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0571 |
Symbol | |
ID | 6089565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 629333 |
End bp | 631021 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641595633 |
Product | polypeptide-transport-associated domain-containing protein |
Protein accession | YP_001719327 |
Protein GI | 170022822 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCGTT TTTATTATTC TATATTAGTG GCTGGCGTAT TATTGAAAAT AGTGGCTATT CCAGATGCCA GTTATGGCGC GGAATTAGCG CCCGTTCAAC AAAGTATTCA CCAACAGGAG CGGCAACGGG CACTTGAAGA GCGCCTGGCT CCGCCGACGC CGGATGTGCG CTTATCTGCG CCCTCGGCCT TTTTTAGACG TATTATTTTT CCGCTGGAGA CACCCTGCTT TGTTATTAAT CGGATAAAAA TCAGTGGGGC CGAGCCATTA CCCCGTTGGT TGCCGTTGCA ACGCATTGCC GATCAAGCGC AAGGCCAGTG TCTGGGGGCC AAGGGCATTA ACCTGCTAAT GAGTCAGATG CAAAACCGTT TGGTCGATCA CGGCTATGTG ACTACCCGAG TGCTGGCCCC ACAGCAGGAT TTAAACAGCG GCACGCTGGC GCTAAACGTC GTGCCCGGCA AAATACGCGG TGTGGAACTG ACGCCAGACA GTAATAGGTA TGTCACGTTA TTCAGCGCTT TTCCTGCCCG TGCCGGGACG CTGTTGGATT TACGCGATAT CGAACAAGGC TTGGAAAATC TACAGCGTGT TCCCACGGTG CAAGCCAATA TGGTGTTGAT CCCAGGCTCT GCCCCCGGTG AGACGGATAT CATTCTGAAC TGGCAACAGC GAAAAATGTG GCGGCTGGCC GCCTCACTGG ATGATTCGGG TACCCGCAGC ACTGGCCGCT ATCAAGGGGG GGCGACGTTG TTTCTGGATA ACCCGCTTTC TCTGAGTGAT CTTTTTTATG TCTCAGCTGG TGGCGCACTG CAACGCCGTG GCGATAAAGG CACGAATAAT CTGACCGGCC ATTACTCATT GCCATTCGGT TATTGGACCG CAGGCATGAC CGCCAGCCGT TATGACTATT ACCAGGCCGT TGCGGGCCTG AATGGCGATA TCAACTACCG AGGTGAAAGT GAGAACGTGG CGTTCCAACT CAGCCGGTTG TTGCACCGTA ATGCCAGCCA GAAAACCACC TTTACCTACG ATGTGCTAAC CCGCTCGTCG AAAAACTATA TCAACGATAC CGAAGTGGAA GTGCAGCGCC GCCACACCTC GGCCTGGCGG ATCGGGCTAC AACACCGCCA CTTTATCTCG CAGGCGATTT TGGATGCCGG TATCAGCTAT CAGCGTGGCA CCCGCTGGTT TGGTGCCATA CCCGCGCAGG AAGAGTATTT CGGCGAAGCC ACCGCCTTGA GCAAAATTCT GCGATTGAAT GCGCAACTGG ATATTCCTTT TGCGGTTATG GCGCAAAACC TCCATTACAA CCTGCAATAT CAGCGCCAAA GTACCAACAC GCCACTGACG CCGCAGGATC AGTTCTCCAT TGGTGGCCGC TGGTCGGTGC GTGGTTTTAA TGGTGAGCGC ACGCTGATTG CCGATCGCGG CTGGTGGGTG CGCAATGATA TCGGCTGGTA TCTGCCGCTA CCGGGGCATG AGCTGTATGT CGGTGTGGAT TACGGCGAAG TCGGTGGTCG TAGTGGCGCT TATCTGTTGG GCCGCCATTT GGCGGGCAGT GCCGTCGGGG TACGTGGCAA CGTACTGAAT ACCCGCTATG ACCTGTTTGC GGGGAAACCG CTCTCTAAAC CTAATGGTTT CAAAACCGAT TCGCTGGCGG TGGGCTTTAA CCTGAATTGG CTGTACTGA
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Protein sequence | MSRFYYSILV AGVLLKIVAI PDASYGAELA PVQQSIHQQE RQRALEERLA PPTPDVRLSA PSAFFRRIIF PLETPCFVIN RIKISGAEPL PRWLPLQRIA DQAQGQCLGA KGINLLMSQM QNRLVDHGYV TTRVLAPQQD LNSGTLALNV VPGKIRGVEL TPDSNRYVTL FSAFPARAGT LLDLRDIEQG LENLQRVPTV QANMVLIPGS APGETDIILN WQQRKMWRLA ASLDDSGTRS TGRYQGGATL FLDNPLSLSD LFYVSAGGAL QRRGDKGTNN LTGHYSLPFG YWTAGMTASR YDYYQAVAGL NGDINYRGES ENVAFQLSRL LHRNASQKTT FTYDVLTRSS KNYINDTEVE VQRRHTSAWR IGLQHRHFIS QAILDAGISY QRGTRWFGAI PAQEEYFGEA TALSKILRLN AQLDIPFAVM AQNLHYNLQY QRQSTNTPLT PQDQFSIGGR WSVRGFNGER TLIADRGWWV RNDIGWYLPL PGHELYVGVD YGEVGGRSGA YLLGRHLAGS AVGVRGNVLN TRYDLFAGKP LSKPNGFKTD SLAVGFNLNW LY
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