Gene YPK_0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0536 
Symbol 
ID6090134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp589052 
End bp589627 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content51% 
IMG OID641595598 
Producthypothetical protein 
Protein accessionYP_001719292 
Protein GI170022787 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.35439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTG GTTACATATT TGCCATGCTA TTCAGCGCCC TACTTTTACA GGGCTGTGTC 
GGCGCGGTGG TCGTCGGTAG TGCGGCGGTT GCCACAAAAA CCGCCACGGA TCCACGTACC
ATCGGTACGC AGGTAGATGA CGGCACACTG GAAGCCAGGG TCGTTAATGC CCTGAGCAAA
GATAAGGAAA TCAAGAGCCA AACACGATTT GTGGTAACGG CTTATCAGGG AAAAGTATTG
CTAACCGGGC AAACCCCATC AGCGGAGCTG TCTAACCGCG CTAAGCAGAT CGCCTCTGGC
GTCGATGGTG CAACGGAAGT CTACAACGAA ATGCGTTTGG GGAAACCGGT TGATCTGAGT
ACTGCATCAA TGGATACCTG GATCACAACC AAAGTACGTT CACAGCTACT CACCAGTGAT
TCGGTTAAAT CCTCTAACGT CAAAGTGACG ACGGAGAACG GCGAAGTCTT CTTATTGGGC
TTGGTCACTC AACAAGAAGC GCAATCGGCG GCACAGATAG CCAGCAAGGT CAGCGGCGTT
AAACACGTCA CGACGGCCTT CACTATTGTT AAATAA
 
Protein sequence
MKVGYIFAML FSALLLQGCV GAVVVGSAAV ATKTATDPRT IGTQVDDGTL EARVVNALSK 
DKEIKSQTRF VVTAYQGKVL LTGQTPSAEL SNRAKQIASG VDGATEVYNE MRLGKPVDLS
TASMDTWITT KVRSQLLTSD SVKSSNVKVT TENGEVFLLG LVTQQEAQSA AQIASKVSGV
KHVTTAFTIV K