| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0529 |
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| Symbol | gltD |
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| ID | 6089710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 576977 |
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| End bp | 578395 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641595591 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001719285 |
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| Protein GI | 170022780 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGA ACGTTTATCA GTTTATCGAC TTACAGCGCG TCGATCCGCC GAAAAAACCG
CTGAAGATCC GTAAAATTGA ATTTGTTGAA ATTTACGAGC CATTCTCAGA AACACAAGCC
AAAGCACAGG CCGATCGCTG CCTGTCCTGC GGCAATCCGT ACTGTGAATG GAAATGCCCG
GTTCATAACT ACATCCCTAA CTGGCTGAAA CTGGCCAACG AGGGGCGGAT TATGGAAGCG
GCTGATCTGG CACACCAAAC GAACAGCCTA CCGGAAGTCT GTGGCCGTGT TTGTCCACAA
GATCGCTTGT GTGAAGGATC TTGTACTCTG AACGACGAAT TTGGTGCCGT GACCATCGGC
AACATCGAGC GTTATATCAG CGACAAAGCC ATTGCGATGG GCTGGAAACC GGATATGTCA
CATGTTCACC CTACCGGTAA ACGTGTGGCC GTGATCGGTG CCGGCCCTGC CGGGCTGGCC
TGTGCTGATG TATTAGCACG TAACGGTGTT CAGGCGGTGG TCTTTGACCG CCATCCAGAA
ATTGGGGGGT TACTGACCTT CGGTATCCCA GCGTTTAAGC TGGAAAAAGA AGTGATGATT
AAACGCCGTA AGATCTTCTC CGAGATGGGA ATTGAATTCC AACTGAATAC TGAAGTAGGC
AAAGACATCA CCATGGAAGC ACTGCTGAAA GATTACGACG CCGTGTTCCT GGGGGTTGGG
ACCTACCAAT CTATGCGTGG TGGTTTGGAA AACGAAGAGG CTAACGGTGT ATATGATGCC
TTGCCTTTCC TGATTGCTAA TACTAAACAG CTAATGGGCT ATGAAGCGAC GGCTCACGAA
CCGTATATCA ACATGCAAGG TAAACGCGTC GTGGTGCTTG GTGGCGGTGA TACCGCAATG
GACTGTGTGC GCTCCTCAAT TCGTCAGGGG GCAACCGATG TGGTTTGCGC CTATCGCCGC
GATGAAGTGA ATATGCCGGG TTCCAAGCGG GAAGTGAAAA ACGCCCGTGA AGAAGGGGTA
GAATTTAAAT TCAACCTGCA ACCATTAAGC ATTGAAGTGA ACAGCAATGG CAAAGTCTGT
GGTGTCAGAA TGGTCCGCAC CCAGTTGGGC GCGCCAGATG CACAGGGCCG GCGCATGGCT
GAACAGATCC CTGGCTCAGA ACATGTATTG CCAGCAGATG CAGTGGTGAT GGCATTTGGT
TTCCGCCCAC ACAGTATGGA ATGGCTGGCC GCTCACGATG TGAAGCTGGA TAAGCAAGGC
CGGGTGATTG CACCGGAAAG CACTGATAAT GCCTTCCAGA CCAGTAACCC GAAAATCTTT
GCGGGCGGCG ATATTGTCCG TGGTTCCGAT TTAGTGGTTA CCGCCATTGC CGAAGGCCGT
AAAGCCGCAG ACGGCATCAT GAATTATCTG GAAGTCTAA
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| Protein sequence | MSQNVYQFID LQRVDPPKKP LKIRKIEFVE IYEPFSETQA KAQADRCLSC GNPYCEWKCP
VHNYIPNWLK LANEGRIMEA ADLAHQTNSL PEVCGRVCPQ DRLCEGSCTL NDEFGAVTIG
NIERYISDKA IAMGWKPDMS HVHPTGKRVA VIGAGPAGLA CADVLARNGV QAVVFDRHPE
IGGLLTFGIP AFKLEKEVMI KRRKIFSEMG IEFQLNTEVG KDITMEALLK DYDAVFLGVG
TYQSMRGGLE NEEANGVYDA LPFLIANTKQ LMGYEATAHE PYINMQGKRV VVLGGGDTAM
DCVRSSIRQG ATDVVCAYRR DEVNMPGSKR EVKNAREEGV EFKFNLQPLS IEVNSNGKVC
GVRMVRTQLG APDAQGRRMA EQIPGSEHVL PADAVVMAFG FRPHSMEWLA AHDVKLDKQG
RVIAPESTDN AFQTSNPKIF AGGDIVRGSD LVVTAIAEGR KAADGIMNYL EV
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