Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0510 |
Symbol | |
ID | 6088130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 560789 |
End bp | 561862 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641595572 |
Product | D-arabinose 5-phosphate isomerase |
Protein accession | YP_001719266 |
Protein GI | 170022761 |
COG category | [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCAGGA AGGCTTGGAG CGAAAGCAAC CAACACACCT ACAGCGTGAA AGATGACGGT AATACCAACA TTGGGCGGAT ATTAAGTATG TCTACTTTTG ATTTACAGCC GGGCGTGGAT TTCCAGCAGG CAGGTAAGCA GGTACTTCAG ATTGAACGCG AAGGGCTGGC TCAACTCGAT CAATACATAA ACGAGGATTT CTCCAGAGCC TGTGAGGCCA TTTTTCGTTG CCACGGCAAA GTCGTCGTGA TGGGAATGGG CAAATCTGGT CATATTGGCT GCAAAATTGC AGCCACATTC GCCAGCACGG GCACACCTGC ATTTTTTGTC CATCCTGGTG AAGCCAGCCA TGGCGATTTG GGCATGATCA CGCCACAAGA TATTGTATTA GCTATCTCTA ACTCTGGGGA ATCCAACGAA ATCCTCACGT TGATCCCCGT GCTTAAGCGC CAGAAAATTC TGTTGATTTG CATGAGCAGT AACCCTGAGA GCACCATGGG TAAAGCGGCC GATATTCACT TGTGCATTAA TGTGCCACAA GAGGCCTGTC CGCTGGGGCT AGCGCCAACC ACCAGTACGA CTGCAACACT GGTTATGGGG GATGCGTTGG CGGTAGCCTT GCTCAAAGCA CGGGGTTTCA CGCAGGAAGA TTTCGCACTC TCTCACCCAG GTGGCGCGCT GGGGCGTAAG TTGCTGCTGC GGATCAGCGA TATTATGCAT ACGGGTACGG AGATCCCCAC CGTCAGCCCT GATGCATCAT TACGTGATGC CTTGCTAGAA ATTACTCGGA AAAGTCTGGG TTTGACCGTT ATTTGTGACG ATTCAATGAG GATTAAAGGT ATCTTTACCG ACGGTGACTT GCGCCGGGTA TTTGATATGG GCATTGATCT GAATAATGCA AAAATTGCTG ACGTCATGAC TCGCGGGGGT ATTCGAGTCC CTCCGAACAT ATTGGCGGTG GACGCGCTCA ATCTGATGGA GTCACGCCAT ATCACTGCGT TGCTCGTCGC TGATGGTGAC CAATTACTGG GTGTCGTACA TATGCACGAT ATGCTGAGAG CCGGTGTTGT CTGA
|
Protein sequence | MLRKAWSESN QHTYSVKDDG NTNIGRILSM STFDLQPGVD FQQAGKQVLQ IEREGLAQLD QYINEDFSRA CEAIFRCHGK VVVMGMGKSG HIGCKIAATF ASTGTPAFFV HPGEASHGDL GMITPQDIVL AISNSGESNE ILTLIPVLKR QKILLICMSS NPESTMGKAA DIHLCINVPQ EACPLGLAPT TSTTATLVMG DALAVALLKA RGFTQEDFAL SHPGGALGRK LLLRISDIMH TGTEIPTVSP DASLRDALLE ITRKSLGLTV ICDDSMRIKG IFTDGDLRRV FDMGIDLNNA KIADVMTRGG IRVPPNILAV DALNLMESRH ITALLVADGD QLLGVVHMHD MLRAGVV
|
| |