Gene YPK_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0471 
Symbol 
ID6090672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp515843 
End bp516712 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content50% 
IMG OID641595533 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001719227 
Protein GI170022722 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0249662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATG CCAATGTTGC ATTATTGCAG TTGTGCAGCG GTGAAAATAC CCGTGACAAT 
CTGGCTCAGA TTGAGCAGCA GATCAAACAG TTAAATGCAG GTATCAAACT GGTTATGACG
CCTGAGAATG CGTTGTTATT TGCTAATGCT GCCTCTTATC GTCACCATGC GGAACACCAT
AATGACGGCC CATTACAGCA AGAAGTGCGT GAAATGGCAC GGCGCTACGG GGTTTGGATA
CAGGTTGGCT CCATGCCGAT GGTGAGCCGT GAGTCACCGG ACCTGATCAC CAGCAGTAGC
TTGTTATTTG ACGATCAAGG CGAACTCAAA GCCCGTTACG ATAAAATTCA CATGTTTGAT
GTCGATATCA ATGATATCCA TGGCCATTAC CGTGAGTCTG ATACTTATCA GCCGGGGCAG
CAGCTGACGG TGGTTGATAC CCCGGTTGGC CGGTTGGGCA TGACCATTTG CTATGATTTG
CGTTTCCCTG GCTTGTTTCA GGCTTTGCGA GCGCAGGGGG CTGAAATCAT TTCTGTTCCG
GCAGCCTTTA CCAAAATGAC GGGTGAGGCG CATTGGGAAA CATTGCTCCG TGCACGGGCT
ATCGAAAACC AGTGCGTGAT ATTGGCTGCC GCACAGGTGG GGCGCCACGG TGCTACCCGC
CGGACGTGGG GTCATACCAT GGCAGTCGAT GCCTGGGGTA AAATTCTGGG GCATAACCCA
GATGCGGTGG CGGCACTAAA AGTAAGAATT GAAACTGCAG GTTTGAAGAC GATTCGCAAT
CAAATGCCGG TCATGCAGCA CAATCGCTTT CAGGCGACGC TGGAGCCGAC ATTGAATAAA
CCATTATTGA ATAAACCACC ATCTAATTAA
 
Protein sequence
MKNANVALLQ LCSGENTRDN LAQIEQQIKQ LNAGIKLVMT PENALLFANA ASYRHHAEHH 
NDGPLQQEVR EMARRYGVWI QVGSMPMVSR ESPDLITSSS LLFDDQGELK ARYDKIHMFD
VDINDIHGHY RESDTYQPGQ QLTVVDTPVG RLGMTICYDL RFPGLFQALR AQGAEIISVP
AAFTKMTGEA HWETLLRARA IENQCVILAA AQVGRHGATR RTWGHTMAVD AWGKILGHNP
DAVAALKVRI ETAGLKTIRN QMPVMQHNRF QATLEPTLNK PLLNKPPSN